RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZIC3O60481 467 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 SERPINA1P01009 418 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 FESP07332 822 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 LINGO3P0C6S8 592 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 GKN3PP0CG01 181 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 PRG2P13727 222 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 HK1P19367 917 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 PGCP20142 388 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 ACAA2P42765 397 aaKnown RBP15.41■□□□□ 0.06
COL7A1-202ENST00000422991 ZNF41P51814 821 aaPredicted RBP15.41■□□□□ 0.06
COL7A1-202ENST00000422991 ZNF136P52737 540 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 TRIM25Q14258 630 aaKnown RBP15.41■□□□□ 0.06
COL7A1-202ENST00000422991 TOMM34Q15785 309 aaPredicted RBP15.41■□□□□ 0.06
COL7A1-202ENST00000422991 NRF1Q16656 503 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 TMEM44Q2T9K0 475 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 CBLL1Q75N03 491 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 TRILQ7L0X0 811 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 ZNF550Q7Z398 422 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 YRDCQ86U90 279 aaKnown RBP15.41■□□□□ 0.06
COL7A1-202ENST00000422991 SPPL2CQ8IUH8 684 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 OR14L1PQ8NHC6 308 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 ZNF524Q96C55 264 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 ASB9Q96DX5 294 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 EVA1AQ9H8M9 152 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 ADPRHL2Q9NX46 363 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 KLHL28Q9NXS3 571 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 ACTR3BQ9P1U1 418 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 VDAC3Q9Y277 283 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 SVILO95425 2214 aa15.41■□□□□ 0.06
COL7A1-202ENST00000422991 M0R3H8 397 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 ETV2O00321 342 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-202ENST00000422991 HCN1O60741 890 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 ATP6V1B2P21281 511 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 TCEA1P23193 301 aaKnown RBP15.4■□□□□ 0.06
COL7A1-202ENST00000422991 RYKP34925 604 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 RGS8P57771 180 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-202ENST00000422991 B3GALT5-AS1P59052 145 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 SELENOWP63302 87 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 FOXK1P85037 733 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 MS4A2Q01362 244 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 QPRTQ15274 297 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 GLYR1Q49A26 553 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-202ENST00000422991 WIPI1Q5MNZ9 446 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-202ENST00000422991 YTHDF3Q7Z739 585 aaKnown RBP15.4■□□□□ 0.06
COL7A1-202ENST00000422991 EID3Q8N140 333 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 OR52E4Q8NGH9 312 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 OR10Q1Q8NGQ4 319 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 ST8SIA1Q92185 356 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 PROX1Q92786 737 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 ZBTB8AQ96BR9 441 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 NSMCE2Q96MF7 247 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 WFDC6Q9BQY6 131 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 DCAF13Q9NV06 445 aaKnown RBP15.4■□□□□ 0.06
COL7A1-202ENST00000422991 RPS6KA6Q9UK32 745 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 DNAJC13O75165 2243 aa15.4■□□□□ 0.06
COL7A1-202ENST00000422991 TRGV5A0A0B4J1U4 118 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 A0A1B0GVC2 190 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 SUSD5O60279 629 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 NTN1O95631 604 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 ZNF682O95780 498 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 UQCRBP14927 111 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 ZNF17P17021 662 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 PRKCAP17252 672 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 DLX5P56178 289 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 HOXC5Q00444 222 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 FOXF1Q12946 379 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 NPTX1Q15818 432 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 KRTCAP3Q53RY4 240 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 SLC25A53Q5H9E4 307 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 RAET1LQ5VY80 246 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 LCN8Q6JVE9 175 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 LACC1Q8IV20 430 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 GHDCQ8N2G8 530 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 GTPBP8Q8N3Z3 284 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-202ENST00000422991 OR4D11Q8NGI4 311 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 NEIL3Q8TAT5 605 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 POC1BQ8TC44 478 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 LZICQ8WZA0 190 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 TPD52L3Q96J77 140 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 HSH2DQ96JZ2 352 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 NPAS1Q99742 590 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 MMADHCQ9H3L0 296 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-202ENST00000422991 ACER3Q9NUN7 267 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 TESQ9UGI8 421 aaKnown RBP15.39■□□□□ 0.05
COL7A1-202ENST00000422991 PRDM4Q9UKN5 801 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 SAMD4AQ9UPU9 718 aaKnown RBP15.39■□□□□ 0.05
COL7A1-202ENST00000422991 SLC9A8Q9Y2E8 581 aa15.39■□□□□ 0.05
COL7A1-202ENST00000422991 RPH3AQ9Y2J0 694 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-202ENST00000422991 MED12Q93074 2177 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 OR2M5A3KFT3 312 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 SHISA8B8ZZ34 492 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 ACOT8O14734 319 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 WISP1O95388 367 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 EDN3P14138 238 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 TNFRSF1BP20333 461 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 EIF1P41567 113 aaKnown RBP15.38■□□□□ 0.05
COL7A1-202ENST00000422991 IDH2P48735 452 aaKnown RBP15.38■□□□□ 0.05
COL7A1-202ENST00000422991 GFRA1P56159 465 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 SESN3P58005 492 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms