RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 OPN1LWP04000 364 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 HOXB9P17482 250 aaPredicted RBP23.73■■□□□ 1.39
CDK9-202ENST00000421939 IL11P20809 199 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 UQCRC1P31930 480 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 PGM1P36871 562 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 DSTNP60981 165 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 SGCBQ16585 318 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 CTU2Q2VPK5 515 aaKnown RBP23.73■■□□□ 1.39
CDK9-202ENST00000421939 ESPNLQ6ZVH7 1005 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 OR10D3Q8NH80 312 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 OR2V1Q8NHB1 315 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 KLHL15Q96M94 604 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 THUMPD3Q9BV44 507 aaKnown RBP23.73■■□□□ 1.39
CDK9-202ENST00000421939 MED4Q9NPJ6 270 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 SLC52A3Q9NQ40 469 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.73■■□□□ 1.39
CDK9-202ENST00000421939 PAQR5Q9NXK6 330 aaPredicted RBP23.73■■□□□ 1.39
CDK9-202ENST00000421939 HEATR5AQ86XA9 2040 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 A0A1W2PNV4 684 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 AGAP5A6NIR3 686 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 ETV2O00321 342 aaPredicted RBP23.72■■□□□ 1.39
CDK9-202ENST00000421939 SYT5O00445 386 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 ADAMDEC1O15204 470 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 DNAJA2O60884 412 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 CRHP06850 196 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 FCGR2AP12318 317 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 NCF2P19878 526 aaPredicted RBP23.72■■□□□ 1.39
CDK9-202ENST00000421939 SSTR2P30874 369 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 SFTPDP35247 375 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 EEF1A1P68104 462 aaKnown RBP23.72■■□□□ 1.39
CDK9-202ENST00000421939 SLC25A53Q5H9E4 307 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 EEF1A1P5Q5VTE0 462 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 LILRA2Q8N149 483 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 ZNF524Q96C55 264 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 C14orf79Q96F83 325 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 ZNF385DQ9H6B1 395 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 RNF122Q9H9V4 155 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 SLC24A3Q9HC58 644 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 THUMPD1Q9NXG2 353 aaKnown RBP23.72■■□□□ 1.39
CDK9-202ENST00000421939 JKAMPQ9P055 326 aa23.72■■□□□ 1.39
CDK9-202ENST00000421939 A0A0J9YW62 118 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 TNFSF11O14788 317 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 BCAS1O75363 584 aaPredicted RBP23.71■■□□□ 1.39
CDK9-202ENST00000421939 TNFSF13O75888 250 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 PGCP20142 388 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 RPS4Y1P22090 263 aaKnown RBP23.71■■□□□ 1.39
CDK9-202ENST00000421939 KCNJ10P78508 379 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 MAPK11Q15759 364 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 LRIF1Q5T3J3 769 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 ST8SIA1Q92185 356 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 PMM1Q92871 262 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 PIGMQ9H3S5 423 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 RAD21L1Q9H4I0 556 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 MTHFD2LQ9H903 347 aaPredicted RBP23.71■■□□□ 1.39
CDK9-202ENST00000421939 EXOSC3Q9NQT5 275 aaKnown RBP23.71■■□□□ 1.39
CDK9-202ENST00000421939 CALML5Q9NZT1 146 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 FOXD3Q9UJU5 478 aaPredicted RBP23.71■■□□□ 1.39
CDK9-202ENST00000421939 PACSIN3Q9UKS6 424 aa23.71■■□□□ 1.39
CDK9-202ENST00000421939 TACC2O95359 2948 aa23.7■■□□□ 1.39
CDK9-202ENST00000421939 CLDN24A6NM45 220 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 CLIC1O00299 241 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 BCHEP06276 602 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 SHC1P29353 583 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 PLAURQ03405 335 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 SELENBP1Q13228 472 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 PDSS1Q5T2R2 415 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 HBMQ6B0K9 141 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 PPP4R4Q6NUP7 873 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 CMIPQ8IY22 773 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 WDR60Q8WVS4 1066 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 SLC25A37Q9NYZ2 338 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 KCNN3Q9UGI6 736 aa23.7■■□□□ 1.38
CDK9-202ENST00000421939 MCTS1Q9ULC4 181 aaKnown RBP23.7■■□□□ 1.38
CDK9-202ENST00000421939 DSPPQ9NZW4 1301 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 GJE1A6NN92 205 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 EFNA2O43921 213 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 CXCL13O43927 109 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 AQP8O94778 261 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 TROVE2P10155 538 aaKnown RBP eCLIP23.69■■□□□ 1.38
CDK9-202ENST00000421939 CD1EP15812 388 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 PEX19P40855 299 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 SLC6A8P48029 635 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 CRISP3P54108 245 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 FADDQ13158 208 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 GNA13Q14344 377 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 PAGE3Q5JUK9 113 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 MSRB3Q8IXL7 192 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 CNEP1R1Q8N9A8 125 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 SLC38A5Q8WUX1 472 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 TMEM234Q8WY98 164 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 PRRG4Q9BZD6 226 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 FGFR1OP2Q9NVK5 253 aa23.69■■□□□ 1.38
CDK9-202ENST00000421939 A0A1W2PP18 115 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 TMEM247A6NEH6 219 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 SYNGR4O95473 234 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 DBIP07108 87 aaKnown RBP23.68■■□□□ 1.38
CDK9-202ENST00000421939 TFPTP0C1Z6 253 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 NID1P14543 1247 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 CPA2P48052 419 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms