RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PIGGQ5H8A4 983 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 ADAM5Q6NVV9 412 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 ALKBH5Q6P6C2 394 aaKnown RBP4.32□□□□□ -1.72
SFXN1-202ENST00000421887 PLXDC2Q6UX71 529 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 H2AFVQ71UI9 128 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 LINC00523Q86TU6 105 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 LRRC6Q86X45 466 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 OTUD6BQ8N6M0 293 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 LSMEM1Q8N8F7 131 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 MFSD9Q8NBP5 474 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 OR14L1PQ8NHC6 308 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 SLC2A12Q8TD20 617 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 OIT3Q8WWZ8 545 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 ATL1Q8WXF7 558 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 PROX1Q92786 737 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 KAT2AQ92830 837 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 STARD4Q96DR4 205 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 KTI12Q96EK9 354 aaPredicted RBP4.32□□□□□ -1.72
SFXN1-202ENST00000421887 APOPT1Q96IL0 206 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 QKIQ96PU8 341 aaKnown RBP eCLIP4.32□□□□□ -1.72
SFXN1-202ENST00000421887 GHITMQ9H3K2 345 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 LRRC40Q9H9A6 602 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 MGAT4CQ9UBM8 478 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 PTBP2Q9UKA9 531 aaKnown RBP4.32□□□□□ -1.72
SFXN1-202ENST00000421887 SNX8Q9Y5X2 465 aa4.32□□□□□ -1.72
SFXN1-202ENST00000421887 PABPN1LA6NDY0 278 aaKnown RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 FAM90A20PA6NIJ5 464 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 SLC22A20A6NK97 555 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF814B7Z6K7 855 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 H3BMM5 538 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 AP3D1O14617 1153 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 TSPAN4O14817 238 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 PSMD3O43242 534 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 DHHO43323 396 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 SPOPO43791 374 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 GUCY1B2O75343 617 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 TRIM3O75382 744 aaPredicted RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 LRATO95237 230 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 DANCRP0C864 163 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF10P21506 573 aaPredicted RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 PTPN6P29350 595 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 PPP2R1BP30154 601 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 RBMXP38159 391 aaKnown RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 CDKN2BP42772 138 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 TMED10P49755 219 aaKnown RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 TERF1P54274 439 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 NAGLUP54802 743 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 TBPL1P62380 186 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 SIRPAP78324 504 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 GGTLC2Q14390 218 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 PTGR1Q14914 329 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 EFTUD2Q15029 972 aaKnown RBP eCLIP4.31□□□□□ -1.722e-6■■■■■ 33.5
SFXN1-202ENST00000421887 RPS6KA1Q15418 735 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 TTLL9Q3SXZ7 439 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 DCST1Q5T197 706 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 FAM69AQ5T7M9 428 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 AGAP6Q5VW22 663 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 AAGABQ6PD74 315 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF474Q6S9Z5 364 aaPredicted RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 MFSD7Q6UXD7 560 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 CLEC17AQ6ZS10 378 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 IFNEQ86WN2 208 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 GPSM1Q86YR5 675 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 CDKL3Q8IVW4 592 aaPredicted RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF595Q8IYB9 648 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 TAGAPQ8N103 731 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 CA13Q8N1Q1 262 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF525Q8N782 197 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 FAM71DQ8N9W8 422 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 C7orf57Q8NEG2 295 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 FAM83FQ8NEG4 500 aaPredicted RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 OR10G3Q8NGC4 313 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 OR1J4Q8NGS1 313 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 NUBPLQ8TB37 319 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF418Q8TF45 676 aaPredicted RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 RHBDF1Q96CC6 855 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 DTNBP1Q96EV8 351 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 REXO5Q96IC2 774 aaKnown RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 RILPQ96NA2 401 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 GAL3ST4Q96RP7 486 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 MECRQ9BV79 373 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 RBM4Q9BWF3 364 aaKnown RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 PLEKHA2Q9HB19 425 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 CLCF1Q9UBD9 225 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 C15orf41Q9Y2V0 281 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 PCDHGB1Q9Y5G3 927 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 CHCHD2Q9Y6H1 151 aaPredicted RBP4.31□□□□□ -1.72
SFXN1-202ENST00000421887 IKBKGQ9Y6K9 419 aa4.31□□□□□ -1.72
SFXN1-202ENST00000421887 CADP27708 2225 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 A0A087X0T9 212 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 A0A096LNT2 108 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 IQANK1A0A1B0GTG1 560 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 TRBC2A0A5B9 178 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 CDC7O00311 574 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 PLOD2O00469 737 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 EMC8O43402 210 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF354AO60765 605 aaPredicted RBP4.3□□□□□ -1.72
SFXN1-202ENST00000421887 CDH16O75309 829 aa4.3□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF189O75820 626 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms