RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ACKR4Q9NPB9 350 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 EQTNQ9NQ60 294 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 ACSS1Q9NUB1 689 aaPredicted RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 ASIC5Q9NY37 505 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 HAO1Q9UJM8 370 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 ACAD8Q9UKU7 415 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 RAP2CQ9Y3L5 183 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 OR10H1Q9Y4A9 318 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 FAM215AQ9Y5M1 114 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 KLF2Q9Y5W3 355 aaPredicted RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 FBN2P35556 2912 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 DCHS2Q6V1P9 2916 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 ABCA12Q86UK0 2595 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 CSMD2Q7Z408 3487 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 CSMD1Q96PZ7 3565 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 C15orf38-AP3S2A0A0A6YYH1 394 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 F2RL2O00254 374 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 WDR1O75083 606 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 CLDN14O95500 239 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 ACP2P11117 423 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 LAMP1P11279 417 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 G6PDP11413 515 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 PRPS1L1P21108 318 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 HTR1EP28566 365 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 GABRA3P34903 492 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 EVI2BP34910 448 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 RPL14P50914 215 aaKnown RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 SLC18A1P54219 525 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 PNLIPRP2P54317 469 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 C21orf58P58505 322 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 MRPS22P82650 360 aaKnown RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 EMX2Q04743 252 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 CRYZQ08257 329 aaKnown RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 MAD2L1Q13257 205 aaPredicted RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 STX3Q13277 289 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 GAB1Q13480 694 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 TOMM20Q15388 145 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 ZNHIT3Q15649 155 aaPredicted RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 WLSQ5T9L3 541 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 CPTPQ5TA50 214 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 RTL6Q6ICC9 239 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 ZNF585AQ6P3V2 769 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 B3GNT6Q6ZMB0 384 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 SZRD1Q7Z422 152 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 RIMKLAQ8IXN7 391 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 KIRREL3Q8IZU9 778 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 KRTCAP2Q8N6L1 136 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 OR1J4Q8NGS1 313 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 NEIL3Q8TAT5 605 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 SDCCAG3Q96C92 435 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 FAM120BQ96EK7 910 aaKnown RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 GIMAP5Q96F15 307 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 NUF2Q9BZD4 464 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 ZMAT3Q9HA38 289 aaKnown RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 SERHLQ9NQF3 203 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 SIRT3Q9NTG7 399 aaPredicted RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 ATAD3AQ9NVI7 634 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 NKIRAS1Q9NYS0 192 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 FLRT3Q9NZU0 649 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 RNF6Q9Y252 685 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 EIF3LQ9Y262 564 aaKnown RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 WIF1Q9Y5W5 379 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 LRBAP50851 2863 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 PHF3Q92576 2039 aaKnown RBP6.28□□□□□ -1.4
HMGN1-205ENST00000419378 FREM3P0C091 2139 aa6.28□□□□□ -1.4
HMGN1-205ENST00000419378 A0A1W2PRB8 838 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 GXYLT2A0PJZ3 443 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 TTC36A6NLP5 189 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 C17orf51A8MQB3 221 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 B4DXG7 233 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 B5MCH6 92 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 C19orf84I3L1E1 186 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 EMC8O43402 210 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 SCO2O43819 266 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 FADS1O60427 444 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 SNNO75324 88 aaPredicted RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 PEX14O75381 377 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 CBR3O75828 277 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 NKX2-2O95096 273 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 C6orf47O95873 294 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 IGKV1D-16P01601 117 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 SRD5A2P31213 254 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 MAP3K8P41279 467 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 RFX3P48380 749 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 PRKAG1P54619 331 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 GAS1P54826 345 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 DIO3P55073 304 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 CLDN8P56748 225 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 NUP107P57740 925 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 RAP2BP61225 183 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 PMPCAQ10713 525 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 DUSP5Q16690 384 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 DECR1Q16698 335 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 ZNF630Q2M218 657 aaPredicted RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 SMU1Q2TAY7 513 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 VPS26BQ4G0F5 336 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 EIPR1Q53HC9 387 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 NHSL2Q5HYW2 709 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms