RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 FAM86C2PA6NEL3 165 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 TMEM200CA6NKL6 621 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 LINC00587B1AMM8 73 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 RNF13O43567 381 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 GSTM3P21266 225 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 WASP42768 502 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 MAPK9P45984 424 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 ST3GAL3Q11203 375 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 SP140Q13342 867 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 TRAM2Q15035 370 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 ZDHHC20Q5W0Z9 365 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 SSX6Q7RTT6 188 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 TMPRSS9Q7Z410 1059 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 ZSCAN1Q8NBB4 408 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 ZCCHC10Q8TBK6 192 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 TMEM255BQ8WV15 326 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 DEFB118Q96PH6 123 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 ARHGAP9Q9BRR9 750 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 ACTR6Q9GZN1 396 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 BRF2Q9HAW0 419 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 HINT3Q9NQE9 182 aaKnown RBP10.91□□□□□ -0.66
DDR1-232ENST00000418800 BABAM2Q9NXR7 383 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 MYEF2Q9P2K5 600 aaKnown RBP10.91□□□□□ -0.66
DDR1-232ENST00000418800 PLEKHA6Q9Y2H5 1048 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 IRGMA1A4Y4 181 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 K7ESM1 405 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 LAMP2P13473 410 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 AKR1C3P42330 323 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 PTH2RP49190 550 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 PNLIPRP1P54315 467 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 FAM71E1Q6IPT2 247 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 OAFQ86UD1 273 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 ZNF461Q8TAF7 563 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 LGALS14Q8TCE9 139 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 HAVCR2Q8TDQ0 301 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 PDXPQ96GD0 296 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 SEC22AQ96IW7 307 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 ZC3H10Q96K80 434 aaKnown RBP10.91□□□□□ -0.66
DDR1-232ENST00000418800 PINK1Q9BXM7 581 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 TINAGL1Q9GZM7 467 aaPredicted RBP10.91□□□□□ -0.66
DDR1-232ENST00000418800 CCDC86Q9H6F5 360 aaKnown RBP10.91□□□□□ -0.66
DDR1-232ENST00000418800 COMMD9Q9P000 198 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 A0A0G2JMZ2 1700 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 LRRC37A2A6NM11 1700 aa10.91□□□□□ -0.66
DDR1-232ENST00000418800 OR2AT4A6NND4 320 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 AGAP14A8MT82 685 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 F5H0A9 414 aaPredicted RBP10.9□□□□□ -0.66
DDR1-232ENST00000418800 PLPP1O14494 284 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 CCL16O15467 120 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 RAD1O60671 282 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 EDNRAP25101 427 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 HSD3B2P26439 372 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 OPRD1P41143 372 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 PRMT2P55345 433 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 SIM1P81133 766 aaPredicted RBP10.9□□□□□ -0.66
DDR1-232ENST00000418800 RBM39Q14498 530 aaKnown RBP10.9□□□□□ -0.66
DDR1-232ENST00000418800 ZNF234Q14588 700 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 HLXQ14774 488 aaPredicted RBP10.9□□□□□ -0.66
DDR1-232ENST00000418800 METTL11BQ5VVY1 283 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 MTSS1LQ765P7 747 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 TET1Q8NFU7 2136 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 OR52I2Q8NH67 350 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 OR4C6Q8NH72 309 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 HSD17B8Q92506 261 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 CHFRQ96EP1 664 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 CYSLTR2Q9NS75 346 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 SLC7A7Q9UM01 511 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 DOCK6Q96HP0 2047 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 TRAV27A0A087WT01 109 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 TRBV5-4A0A0C4DH59 114 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 OR14I1A6ND48 311 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 LRIT2A6NDA9 550 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 ZNF860A6NHJ4 632 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 ACOD1A6NK06 481 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 CCR8P51685 355 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 LUMP51884 338 aaPredicted RBP10.9□□□□□ -0.66
DDR1-232ENST00000418800 SEC61A1P61619 476 aaKnown RBP10.9□□□□□ -0.66
DDR1-232ENST00000418800 OCLNQ16625 522 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 MINDY4Q4G0A6 757 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 FAM46CQ5VWP2 391 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 OLFML2AQ68BL7 652 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 ZC3H14Q6PJT7 736 aaKnown RBP10.9□□□□□ -0.66
DDR1-232ENST00000418800 NUDT13Q86X67 352 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 SIRT6Q8N6T7 355 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 GNPDA2Q8TDQ7 276 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 SCARB1Q8WTV0 552 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 GHSRQ92847 366 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 PDCD1LG2Q9BQ51 273 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 BIN3Q9NQY0 253 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 SEMA4GQ9NTN9 838 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 A4GNTQ9UNA3 340 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 VPS13AQ96RL7 3174 aa10.9□□□□□ -0.66
DDR1-232ENST00000418800 A0A1W2PS29 197 aa10.9□□□□□ -0.67
DDR1-232ENST00000418800 CA12O43570 354 aa10.9□□□□□ -0.67
DDR1-232ENST00000418800 FCMRO60667 390 aa10.9□□□□□ -0.67
DDR1-232ENST00000418800 PTP4A3O75365 173 aa10.9□□□□□ -0.67
DDR1-232ENST00000418800 VNN2O95498 520 aa10.9□□□□□ -0.67
DDR1-232ENST00000418800 C1orf105O95561 183 aa10.9□□□□□ -0.67
DDR1-232ENST00000418800 MT-ND5P03915 603 aa10.9□□□□□ -0.67
DDR1-232ENST00000418800 HMGA1P17096 107 aaKnown RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms