RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 SLC38A3Q99624 504 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 PHF11Q9UIL8 331 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 ZNF222Q9UK12 451 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 CES1P1Q9UKY3 287 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 CLCA2Q9UQC9 943 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 GSTK1Q9Y2Q3 226 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 SPTBP11277 2137 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 NINQ8N4C6 2090 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 URADA6NGE7 173 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 SLC9B1P1A6NJY1 282 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 B3GALT2O43825 422 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 NCR1O76036 304 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 CSNK2A2P19784 350 aaPredicted RBP12.86□□□□□ -0.35
LINC00940-201ENST00000418006 CXCL12P48061 93 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 XKP51811 444 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 LIM2P55344 173 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 SEC23BQ15437 767 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 GRK1Q15835 563 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 SNAPC1Q16533 368 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 OCLNQ16625 522 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 COL28A1Q2UY09 1125 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 CRB2Q5IJ48 1285 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 CLLU1Q5K131 121 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 BCL2L15Q5TBC7 163 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 GKN2Q86XP6 184 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 CSNK1A1LQ8N752 337 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 AVL9Q8NBF6 648 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 DPCDQ9BVM2 203 aaPredicted RBP12.86□□□□□ -0.35
LINC00940-201ENST00000418006 CHRDQ9H2X0 955 aa12.86□□□□□ -0.35
LINC00940-201ENST00000418006 LDB3O75112 727 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 IFNW1P05000 195 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 HMGN2P05204 90 aaKnown RBP12.85□□□□□ -0.35
LINC00940-201ENST00000418006 NR2F1P10589 423 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 ICAM2P13598 275 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 SLC6A1P30531 599 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 TSFMP43897 325 aaKnown RBP12.85□□□□□ -0.35
LINC00940-201ENST00000418006 WNT4P56705 351 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 EXOSC2Q13868 293 aaKnown RBP12.85□□□□□ -0.35
LINC00940-201ENST00000418006 GPR176Q14439 515 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 FGFBP1Q14512 234 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 KLHL12Q53G59 568 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 NKAIN2Q5VXU1 208 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 ZNF655Q8N720 491 aaPredicted RBP12.85□□□□□ -0.35
LINC00940-201ENST00000418006 LSM14AQ8ND56 463 aaKnown RBP12.85□□□□□ -0.35
LINC00940-201ENST00000418006 CADM4Q8NFZ8 388 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 GATAD2BQ8WXI9 593 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 EMC7Q9NPA0 242 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 SEMA3GQ9NS98 782 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 LYARQ9NX58 379 aaKnown RBP12.85□□□□□ -0.35
LINC00940-201ENST00000418006 SLCO1C1Q9NYB5 712 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 TVP23BQ9NYZ1 205 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 TESQ9UGI8 421 aaKnown RBP12.85□□□□□ -0.35
LINC00940-201ENST00000418006 KCND3Q9UK17 655 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 CFAP54Q96N23 3096 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 TLX2O43763 284 aaPredicted RBP12.85□□□□□ -0.35
LINC00940-201ENST00000418006 PRKYO43930 277 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 IFNA14P01570 189 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 HOXD4P09016 255 aaPredicted RBP12.85□□□□□ -0.35
LINC00940-201ENST00000418006 TPBGQ13641 420 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 GPAT4Q86UL3 456 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 IQCF1Q8N6M8 205 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 OR6C4Q8NGE1 309 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 SERINC2Q96SA4 455 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 MAP3K3Q99759 626 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 RBCK1Q9BYM8 510 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 KCNE3Q9Y6H6 103 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 CACNA1IQ9P0X4 2223 aa12.85□□□□□ -0.35
LINC00940-201ENST00000418006 PRAMEF27A3QJZ7 478 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 FAM221BA6H8Z2 402 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 RRASP10301 218 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 MYF5P13349 255 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 STOMP27105 288 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 FGF9P31371 208 aaPredicted RBP12.84□□□□□ -0.35
LINC00940-201ENST00000418006 PCBP3P57721 371 aaKnown RBP12.84□□□□□ -0.35
LINC00940-201ENST00000418006 CTAG1AP78358 180 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 TNFRSF17Q02223 184 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 SRSF5Q13243 272 aaKnown RBP12.84□□□□□ -0.35
LINC00940-201ENST00000418006 PUM1Q14671 1186 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC00940-201ENST00000418006 PLA1AQ53H76 456 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 C6orf132Q5T0Z8 1188 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 PRR14Q9BWN1 585 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 HDHD2Q9H0R4 259 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 PPA2Q9H2U2 334 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 KCMF1Q9P0J7 381 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 POMT2Q9UKY4 750 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 DAPP1Q9UN19 280 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 OR10H3O60404 316 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 SERPINI2O75830 405 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 APOL3O95236 402 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 MPC2O95563 127 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 IFNA7P01567 189 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 PRKACAP17612 351 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 TLX1P31314 330 aaPredicted RBP12.84□□□□□ -0.35
LINC00940-201ENST00000418006 GABRA5P31644 462 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 ATP12AP54707 1039 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 SHC2P98077 582 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 MLLT1Q03111 559 aaPredicted RBP12.84□□□□□ -0.35
LINC00940-201ENST00000418006 MLC1Q15049 377 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
LINC00940-201ENST00000418006 GARNL3Q5VVW2 1013 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms