RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 REV1Q9UBZ9 1251 aa7.4□□□□□ -1.22
AP001042.1-201ENST00000416842 MRTO4Q9UKD2 239 aaKnown RBP7.4□□□□□ -1.22
AP001042.1-201ENST00000416842 TCFL5Q9UL49 500 aa7.4□□□□□ -1.22
AP001042.1-201ENST00000416842 NDRG4Q9ULP0 352 aaKnown RBP7.4□□□□□ -1.22
AP001042.1-201ENST00000416842 PTRH2Q9Y3E5 179 aaKnown RBP7.4□□□□□ -1.22
AP001042.1-201ENST00000416842 TESMINQ9Y4I5 508 aa7.4□□□□□ -1.22
AP001042.1-201ENST00000416842 U3KQV3 271 aa7.4□□□□□ -1.22
AP001042.1-201ENST00000416842 NINQ8N4C6 2090 aa7.4□□□□□ -1.23
AP001042.1-201ENST00000416842 POLQO75417 2590 aa7.4□□□□□ -1.23
AP001042.1-201ENST00000416842 FBN2P35556 2912 aa7.4□□□□□ -1.23
AP001042.1-201ENST00000416842 F8P00451 2351 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 A0A087WUU8 490 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 NPIPA5A0A0B4J1W7 369 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 TRBV4-1A0A0J9YWV2 114 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 A1L4Q6 167 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 NPIPA7E9PJI5 369 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 FRS3O43559 492 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 MITFO75030 526 aaPredicted RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 E2F6O75461 281 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 SEC24DO94855 1032 aaPredicted RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 UTS2O95399 124 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 GASTP01350 101 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 GNAO1P09471 354 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 FBXO45P0C2W1 286 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 NPIPA8P0DM63 369 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 CYP4B1P13584 511 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 LIFP15018 202 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 TCN2P20062 427 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ENDOUP21128 410 aaKnown RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 F8A1P23610 371 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 POLR2IP36954 125 aaKnown RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 RPS6KA3P51812 740 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 NR0B1P51843 470 aaKnown RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 CDH12P55289 794 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 SPIBQ01892 262 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ALDH6A1Q02252 535 aaKnown RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ST3GAL3Q11203 375 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 COX10Q12887 443 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 EPS8Q12929 822 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 CHAF1BQ13112 559 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 SKP2Q13309 424 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 MED21Q13503 144 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 OR1Q1Q15612 314 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 EXT1Q16394 746 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ZNF791Q3KP31 576 aaPredicted RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 TMEM164Q5U3C3 297 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 FAM69BQ5VUD6 431 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 TTC23Q5W5X9 447 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ZNF613Q6PF04 617 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 NUP54Q7Z3B4 507 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 GDF7Q7Z4P5 450 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ZER1Q7Z7L7 766 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ZNF440Q8IYI8 595 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 RNF113BQ8IZP6 322 aaKnown RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 OR10G2Q8NGC3 310 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 OR5L2Q8NGL0 311 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 VANGL1Q8TAA9 524 aaPredicted RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 SSC4DQ8WTU2 575 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 NKD1Q969G9 470 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ZNF524Q96C55 264 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 C8orf44Q96CB5 159 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 PITX2Q99697 317 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 MCHR1Q99705 422 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ZNF559Q9BR84 538 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 FNDC11Q9BVV2 318 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 YTHDF1Q9BYJ9 559 aaKnown RBP7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 RTN4RQ9BZR6 473 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 LAT2Q9GZY6 243 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 ADAM19Q9H013 955 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 TOR3AQ9H497 397 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 SH2D2AQ9NP31 389 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 MYOTQ9UBF9 498 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 MGAT4BQ9UQ53 548 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 SLC35A3Q9Y2D2 325 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 OR10H1Q9Y4A9 318 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 PCDHGB5Q9Y5G0 923 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 NPFFR2Q9Y5X5 522 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 LRBAP50851 2863 aa7.39□□□□□ -1.23
AP001042.1-201ENST00000416842 IGLV3-32A0A0A0MS00 114 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 A0A0B4J2E0 115 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 LOC100130705A0A1B0GUX0 176 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 A0A1B0GX12 115 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 TRAPPC13A5PLN9 417 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 TRIM64CA6NLI5 447 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 STMND1H3BQB6 276 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 ETV2O00321 342 aaPredicted RBP7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 EIF4E2O60573 245 aaKnown RBP7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 UGT2B11O75310 529 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 PPM1BO75688 479 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 CCNB2O95067 398 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 ADAP00813 363 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 IGF2P01344 180 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 GKN3PP0CG01 181 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 GNLYP22749 145 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 COL8A1P27658 744 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 RYKP34925 604 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 OMPP47874 163 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 GSSP48637 474 aa7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 CLK3P49761 638 aaKnown RBP7.38□□□□□ -1.23
AP001042.1-201ENST00000416842 RAD23AP54725 363 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms