RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SPPL2AQ8TCT8 520 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 CHAC2Q8WUX2 184 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 SGCDQ92629 289 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 DIO2Q92813 273 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 TP53INP1Q96A56 240 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 OMA1Q96E52 524 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 C7orf34Q96L11 122 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 RDH12Q96NR8 316 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 G6PC3Q9BUM1 346 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 FAM117AQ9C073 453 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 POLE4Q9NR33 117 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 ABCG2Q9UNQ0 655 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 PCNX3Q9H6A9 2034 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 FAM172BPA6NC97 362 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 NPIPB9F8W1W9 429 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 SNPHO15079 494 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 TSPAN2O60636 221 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 IL33O95760 270 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 DCTP40126 519 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ELOAQ14241 798 aaKnown RBP14.25□□□□□ -0.13
SHMT2-202ENST00000414700 IQCCQ4KMZ1 466 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 FAM209AQ5JX71 171 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 C6orf141Q5SZD1 244 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 TTC23Q5W5X9 447 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF836Q6ZNA1 936 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 RAB43Q86YS6 212 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 PEX5LQ8IYB4 626 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF614Q8N883 585 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ZBTB20Q9HC78 741 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF443Q9Y2A4 671 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ZZEF1O43149 2961 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ATMQ13315 3056 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF99A8MXY4 864 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-202ENST00000414700 M0R3H8 397 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 NKX2-8O15522 239 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 TLX3O43711 291 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-202ENST00000414700 SEMA7AO75326 666 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ALPLP05186 524 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 PRKAR1AP10644 381 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-202ENST00000414700 PPP5CP53041 499 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 OTUD3Q5T2D3 398 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-202ENST00000414700 APOOLQ6UXV4 268 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 USP43Q70EL4 1123 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ZDHHC21Q8IVQ6 265 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 SLC34A3Q8N130 599 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 SIRT6Q8N6T7 355 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 OR5L2Q8NGL0 311 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 OR5M3Q8NGP4 307 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 VANGL1Q8TAA9 524 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-202ENST00000414700 FAM122AQ96E09 287 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ARPC5LQ9BPX5 153 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 MAGIXQ9H6Y5 334 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 NEK6Q9HC98 313 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 IL1RAPQ9NPH3 570 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 CARD8Q9Y2G2 431 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 NPFFR2Q9Y5X5 522 aa14.25□□□□□ -0.13
SHMT2-202ENST00000414700 ANKRD11Q6UB99 2663 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-202ENST00000414700 ICOSLGO75144 302 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 INMTO95050 263 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 CYP4B1P13584 511 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 PCMT1P22061 227 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 CASP3P42574 277 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 MAGEA2P43356 314 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 NKX2-5P52952 324 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-202ENST00000414700 TPD52P55327 224 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-202ENST00000414700 EEF1A1P68104 462 aaKnown RBP14.24□□□□□ -0.13
SHMT2-202ENST00000414700 EPS8Q12929 822 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 IFI44LQ53G44 452 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 DCAF10Q5QP82 559 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 B3GNTL1Q67FW5 361 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-202ENST00000414700 NDNFQ8TB73 568 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF354BQ96LW1 612 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 DACH2Q96NX9 599 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 RASL10BQ96S79 203 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 SPATA5L1Q9BVQ7 753 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 RTN4RQ9BZR6 473 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 AMBRA1Q9C0C7 1298 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 POLE3Q9NRF9 147 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 PCDHGA10Q9Y5H3 936 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 URB1O60287 2271 aaKnown RBP14.24□□□□□ -0.13
SHMT2-202ENST00000414700 C17orf51A8MQB3 221 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 J3KTA2 159 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 ITGA10O75578 1167 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 UPK1BO75841 260 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 UTS2O95399 124 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 LGI1O95970 557 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 NID1P14543 1247 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 IL12BP29460 328 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 PLA2G5P39877 138 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 ATP12AP54707 1039 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 NRG3P56975 720 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 FBXW4P57775 412 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 HOXC5Q00444 222 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 PPP1R8Q12972 351 aaKnown RBP14.24□□□□□ -0.13
SHMT2-202ENST00000414700 MRPL2Q5T653 305 aaKnown RBP14.24□□□□□ -0.13
SHMT2-202ENST00000414700 LYPD8Q6UX82 237 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 PRSS48Q7RTY5 328 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 TSPYL5Q86VY4 417 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-202ENST00000414700 DYNC2LI1Q8TCX1 351 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms