RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 DEFB127Q9H1M4 99 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 REEP4Q9H6H4 257 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 FOLH1BQ9HBA9 442 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 EQTNQ9NQ60 294 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS41-205ENST00000414632 PPP4R1LQ9P1A2 415 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 AASSQ9UDR5 926 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 SEC14L3Q9UDX4 400 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 ZNF639Q9UID6 485 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 KLF13Q9Y2Y9 288 aaPredicted RBP4.46□□□□□ -1.7
VPS41-205ENST00000414632 LIPGQ9Y5X9 500 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 NAV2Q8IVL1 2488 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 DOPEY2Q9Y3R5 2298 aa4.46□□□□□ -1.7
VPS41-205ENST00000414632 UQCRHLA0A096LP55 91 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 GXYLT2A0PJZ3 443 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 A1L4Q6 167 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ASPDHA6ND91 283 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 OR6C76A6NM76 312 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 DIRC3C9JPN6 131 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 KLRC4-KLRK1H3BQV0 150 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 SDHDO14521 159 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 SCAMP2O15127 329 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 LRRTM2O43300 516 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 SNNO75324 88 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 CRYABP02511 175 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 P04436 131 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ABCB1P08183 1280 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 ALDOCP09972 364 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 LAMP1P11279 417 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 TCEA1P23193 301 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 ABCD3P28288 659 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 MPIP34949 423 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 HPCAL1P37235 193 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 MAGEA5P43359 124 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ASMTP46597 345 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 EMDP50402 254 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 CASP6P55212 293 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 PPIAP62937 165 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 KCNJ2P63252 427 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 PLCXD2Q0VAA5 305 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 SF3A3Q12874 501 aaKnown RBP eCLIP4.45□□□□□ -1.7
VPS41-205ENST00000414632 HLXQ14774 488 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 CEBPEQ15744 281 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 INAQ16352 499 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ZNF791Q3KP31 576 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 SLC9B1Q4ZJI4 515 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 FHL5Q5TD97 284 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ATG16L1Q676U5 607 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ZNF324BQ6AW86 544 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 HIST2H2BCQ6DN03 193 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 C3P1Q6ZMU1 363 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 Q6ZRM9 215 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 RINLQ6ZS11 566 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 RNF165Q6ZSG1 346 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 NCCRP1Q6ZVX7 275 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 IKBIPQ70UQ0 350 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 MAVSQ7Z434 540 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 FJX1Q86VR8 437 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 SIAH3Q8IW03 269 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 IZUMO1Q8IYV9 350 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 TAGAPQ8N103 731 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 CLEC4FQ8N1N0 589 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 SYT8Q8NBV8 401 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ST6GALNAC3Q8NDV1 305 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 OR2M7Q8NG81 312 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 OR7G1Q8NGA0 311 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 OR8K3Q8NH51 312 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 FAM76AQ8TAV0 307 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ZNF675Q8TD23 568 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 DYDC1Q8WWB3 177 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 PIK3R3Q92569 461 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ZNF75CPQ92670 426 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 TMBIM1Q969X1 311 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 EFHD2Q96C19 240 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 CTHRC1Q96CG8 243 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 OMA1Q96E52 524 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 THOC1Q96FV9 657 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 C16orf58Q96GQ5 468 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 GPR137Q96N19 417 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 NODALQ96S42 347 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 BARD1Q99728 777 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 SH3GL2Q99962 352 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 TTTY12Q9BZ98 90 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 AMBRA1Q9C0C7 1298 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 WDR55Q9H6Y2 383 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 TRIM45Q9H8W5 580 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 PROK2Q9HC23 129 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 SLCO1B3Q9NPD5 702 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 DDX18Q9NVP1 670 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 ZNF446Q9NWS9 450 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 FLRT3Q9NZU0 649 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 KCNE5Q9UJ90 142 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 ERRFI1Q9UJM3 462 aaPredicted RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 EIF3LQ9Y262 564 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 TMED5Q9Y3A6 229 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 SNX8Q9Y5X2 465 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.45□□□□□ -1.7
VPS41-205ENST00000414632 CENPEQ02224 2701 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 DNAJC13O75165 2243 aa4.45□□□□□ -1.7
VPS41-205ENST00000414632 DIDO1Q9BTC0 2240 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms