RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 OLIG3Q7RTU3 272 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 DPP10Q8N608 796 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 PCYOX1LQ8NBM8 494 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 TMEM19Q96HH6 336 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 KLHL15Q96M94 604 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 TREX2Q9BQ50 279 aaPredicted RBP13.26□□□□□ -0.29
CHD1-202ENST00000414220 SFXN3Q9BWM7 321 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 PINK1Q9BXM7 581 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 A4GALTQ9NPC4 353 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 SLC52A3Q9NQ40 469 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 VAPAQ9P0L0 249 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 FOXD3Q9UJU5 478 aaPredicted RBP13.26□□□□□ -0.29
CHD1-202ENST00000414220 GMEB1Q9Y692 573 aa13.26□□□□□ -0.29
CHD1-202ENST00000414220 DOPEY1Q5JWR5 2465 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 PRAMEF27A3QJZ7 478 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 NPPAP01160 153 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 CRHP06850 196 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 THBS1P07996 1170 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 SLC6A2P23975 617 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 COL8A1P27658 744 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 SLC7A1P30825 629 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 RYKP34925 604 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 APOBEC1P41238 236 aaKnown RBP13.25□□□□□ -0.29
CHD1-202ENST00000414220 HTR3AP46098 478 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 SUCLG1P53597 346 aaKnown RBP13.25□□□□□ -0.29
CHD1-202ENST00000414220 COPZ1P61923 177 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 SELENBP1Q13228 472 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 NDUFAF6Q330K2 333 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 RUNDC3AQ59EK9 446 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 SLC25A53Q5H9E4 307 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 COQ5Q5HYK3 327 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 SEM1Q6ZVN7 128 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 ZNF550Q7Z398 422 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 CPLX4Q7Z7G2 160 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 ADGRE4PQ86SQ3 457 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 OR2V1Q8NHB1 315 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 ZG16BQ96DA0 208 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 ZNF317Q96PQ6 595 aaPredicted RBP13.25□□□□□ -0.29
CHD1-202ENST00000414220 ZNF607Q96SK3 696 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 CGREF1Q99674 301 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 UCK2Q9BZX2 261 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 BCL2L10Q9HD36 194 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 GID8Q9NWU2 228 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 SLC25A37Q9NYZ2 338 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 SLAMF8Q9P0V8 285 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 CLCF1Q9UBD9 225 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 CAPN7Q9Y6W3 813 aa13.25□□□□□ -0.29
CHD1-202ENST00000414220 FREM3P0C091 2139 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 NKX2-6A6NCS4 301 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 ADAMDEC1O15204 470 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 OIP5O43482 229 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 SERPINB7O75635 380 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 TOXO94900 526 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 PLGP00747 810 aaPredicted RBP13.24□□□□□ -0.29
CHD1-202ENST00000414220 C1QCP02747 245 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 ETS2P15036 469 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 GPX2P18283 190 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 PSMA4P25789 261 aaKnown RBP13.24□□□□□ -0.29
CHD1-202ENST00000414220 ASCL1P50553 236 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 CLDN20P56880 219 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 CARD18P57730 90 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 SESN3P58005 492 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 CDK6Q00534 326 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 RBBP4Q09028 425 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 KLF10Q13118 480 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 PON3Q15166 354 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 ZNF311Q5JNZ3 666 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 HBMQ6B0K9 141 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 CGB2Q6NT52 195 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 REEP3Q6NUK4 255 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 C3orf33Q6P1S2 294 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 DLEU7Q6UYE1 221 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 GRINAQ7Z429 371 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 MCEMP1Q8IX19 187 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 C9orf106Q8NAJ2 232 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 FAM71CQ8NEG0 241 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 ATP6V1C2Q8NEY4 427 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 BHLHE22Q8NFJ8 381 aaPredicted RBP13.24□□□□□ -0.29
CHD1-202ENST00000414220 SLC25A43Q8WUT9 341 aaPredicted RBP13.24□□□□□ -0.29
CHD1-202ENST00000414220 INTS12Q96CB8 462 aaKnown RBP13.24□□□□□ -0.29
CHD1-202ENST00000414220 ANKRD27Q96NW4 1050 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 SPOCK3Q9BQ16 436 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 QRSL1Q9H0R6 528 aaKnown RBP13.24□□□□□ -0.29
CHD1-202ENST00000414220 PIGMQ9H3S5 423 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 TMEM38AQ9H6F2 299 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 TMEM185BQ9H7F4 350 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 SAR1AQ9NR31 198 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 GLRX2Q9NS18 164 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 ACER3Q9NUN7 267 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 SLC13A4Q9UKG4 626 aa13.24□□□□□ -0.29
CHD1-202ENST00000414220 ICE1Q9Y2F5 2266 aa13.23□□□□□ -0.29
CHD1-202ENST00000414220 CENPVL1A0A0U1RR11 272 aa13.23□□□□□ -0.29
CHD1-202ENST00000414220 PRORSD1PA6NEY8 169 aa13.23□□□□□ -0.29
CHD1-202ENST00000414220 CFAP73A6NFT4 308 aa13.23□□□□□ -0.29
CHD1-202ENST00000414220 TNFSF11O14788 317 aa13.23□□□□□ -0.29
CHD1-202ENST00000414220 DNAJA2O60884 412 aa13.23□□□□□ -0.29
CHD1-202ENST00000414220 PGM3O95394 542 aa13.23□□□□□ -0.29
CHD1-202ENST00000414220 ARAFP10398 606 aa13.23□□□□□ -0.29
CHD1-202ENST00000414220 HOXB9P17482 250 aaPredicted RBP13.23□□□□□ -0.29
CHD1-202ENST00000414220 RPS4Y1P22090 263 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms