RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 PSMG1O95456 288 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 OXSR1O95747 527 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 KRT6AP02538 564 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 KRT6BP04259 564 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 JUNP05412 331 aaKnown RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SNRPAP09012 282 aaKnown RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 IFI6P09912 130 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 LINGO3P0C6S8 592 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 BMP2P12643 396 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SHC1P29353 583 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 TYK2P29597 1187 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SLC7A1P30825 629 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 NTSP30990 170 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 LCN1P31025 176 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 GABRA3P34903 492 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 KRT6CP48668 564 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SERPINB8P50452 374 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 NCBP2P52298 156 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 RAC3P60763 192 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 PHC1P78364 1004 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 ACSM2AQ08AH3 577 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 RASGEF1BQ0VAM2 473 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 TMEM176BQ3YBM2 270 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SPIN4Q56A73 249 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 FBXW9Q5XUX1 488 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 ACSM2BQ68CK6 577 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 B3GLCTQ6Y288 498 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 TIFABQ6ZNK6 161 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 RINLQ6ZS11 566 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SLC46A3Q7Z3Q1 461 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 GALNT5Q7Z7M9 940 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 GSPT2Q8IYD1 628 aaKnown RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 UBE2J2Q8N2K1 259 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 ZNF433Q8N7K0 673 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 PTGR2Q8N8N7 351 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 LINC01356Q8N9X3 169 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SEMA6DQ8NFY4 1073 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 OR52N5Q8NH56 324 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 B4GALNT2Q8NHY0 566 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 POC1BQ8TC44 478 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 GPR151Q8TDV0 419 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 ZNF418Q8TF45 676 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 ZFP90Q8TF47 636 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 FAM216AQ8WUB2 273 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 FBXO17Q96EF6 278 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SH3YL1Q96HL8 342 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SORCS2Q96PQ0 1159 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 JMJD8Q96S16 334 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 NPAS1Q99742 590 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 VRK1Q99986 396 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 PSD2Q9BQI7 771 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SRXN1Q9BYN0 137 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 MIEF1Q9NQG6 463 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 UBQLN4Q9NRR5 601 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 EMC3Q9P0I2 261 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 NTMQ9P121 344 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 FBXO9Q9UK97 447 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 GRID1Q9ULK0 1009 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 SLC25A15Q9Y619 301 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 GPC6Q9Y625 555 aaPredicted RBP5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 ATP23Q9Y6H3 246 aa5.27□□□□□ -1.57
HMGN1P20-201ENST00000411849 ANK3Q12955 4377 aaKnown RBP5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 NPIPA5A0A0B4J1W7 369 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 A0A1W2PQD3 144 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 GXYLT2A0PJZ3 443 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 LRP5LA4QPB2 252 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 SERINC4A6NH21 518 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 NPIPA7E9PJI5 369 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 UPK1AO00322 258 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 SCDO00767 359 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 ZNF195O14628 629 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 CYTIPO60759 359 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 SLU7O95391 586 aaKnown RBP5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 HSPA4LO95757 839 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 NUDT14O95848 222 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 IGKV1D-16P01601 117 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 ERCC1P07992 297 aaPredicted RBP5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 RBP1P09455 135 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 ANXA4P09525 319 aaPredicted RBP5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 TACSTD2P09758 323 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 NPIPA8P0DM63 369 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 DDCP20711 480 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 ENPP1P22413 925 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 GIFP27352 417 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 APEX1P27695 318 aaKnown RBP5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 TIA1P31483 386 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 SERPINB4P48594 390 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 DVL1P1P54792 670 aaPredicted RBP5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 SUMO3P55854 103 aaPredicted RBP5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 LGALS3BPQ08380 585 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 FOXF1Q12946 379 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 SELENBP1Q13228 472 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 MLC1Q15049 377 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 SWI5Q1ZZU3 235 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 TECRLQ5HYJ1 363 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 LETMD1Q6P1Q0 360 aa5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 SHQ1Q6PI26 577 aaKnown RBP5.26□□□□□ -1.57
HMGN1P20-201ENST00000411849 DEF8Q6ZN54 512 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms