RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 NARFLQ9H6Q4 476 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RPAP3Q9H6T3 665 aaPredicted RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 VIPAS39Q9H9C1 493 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 DAZ1Q9NQZ3 744 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 PNPLA3Q9NST1 481 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 MARCH5Q9NX47 278 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 PPP1R14DQ9NXH3 145 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 DNAJC27Q9NZQ0 273 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 MPP6Q9NZW5 540 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 MRPL15Q9P015 296 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 VPS18Q9P253 973 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 PCYOX1Q9UHG3 505 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 DDX20Q9UHI6 824 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 GNPTGQ9UJJ9 305 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ANAPC5Q9UJX4 755 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 FBXL4Q9UKA2 621 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 KLK9Q9UKQ9 250 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RPL26L1Q9UNX3 145 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ERVK-19Q9WJR5 959 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RRP7AQ9Y3A4 280 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 KLF12Q9Y4X4 402 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 NEUROG3Q9Y4Z2 214 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 PCDHGB7Q9Y5F8 929 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 MYH14Q7Z406 1995 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 DOCK11Q5JSL3 2073 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CENPFP49454 3210 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 AFDNP55196 1824 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLIT1O75093 1534 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 KDM5BQ9UGL1 1544 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 DICER1Q9UPY3 1922 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SYNJ1O43426 1573 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 A0A087X0T9 212 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TEX48A0A1B0GUV7 120 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TCRBV16S1A1N1A0A5B0 115 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 GOLGA6L9A6NEM1 432 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMEM202A6NGA9 273 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 AQP12BA6NM10 295 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 M0QZQ0 153 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 INPP4BO15327 924 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CRXO43186 299 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TNFSF12O43508 249 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 HCRTR1O43613 425 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TSPAN1O60635 241 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SEC22BO75396 215 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 KRT38O76015 456 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CIAO1O76071 339 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 KIAA0754O94854 1291 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMCC1O94876 653 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 GJB5O95377 273 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 H6PDO95479 791 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 LY6G6CO95867 125 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 WDPCPO95876 746 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 IGHV1-46P01743 117 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 AHSGP02765 367 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 FYNP06241 537 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 PARP1P09874 1014 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SKILP12757 684 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 IL1RNP18510 177 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 MCCP23508 829 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 FMO3P31513 532 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 RYKP34925 604 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 RFC1P35251 1148 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 PPM1AP35813 382 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 HSD17B2P37059 387 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 MPV17P39210 176 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 PAFAH1B1P43034 410 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 XCR1P46094 333 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 POU3F4P49335 361 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SGSHP51688 502 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 THOP1P52888 689 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 GFERP55789 205 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 RPL37P61927 97 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 EFNB1P98172 346 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 PLIN5Q00G26 463 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 RELAQ04206 551 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 DMPKQ09013 629 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CHAF1BQ13112 559 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SNAPC2Q13487 334 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMEM132DQ14C87 1099 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 WTAPQ15007 396 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CDK10Q15131 360 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 PDGFRLQ15198 375 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 DUOXA1Q1HG43 343 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 GFOD2Q3B7J2 385 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 ADCK5Q3MIX3 580 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 POM121L1PQ3SYA9 428 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 DNAJC21Q5F1R6 531 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CT83Q5H943 113 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 RABGAP1LQ5R372 815 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 LDLRAP1Q5SW96 308 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 C10orf55Q5SWW7 151 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TEX35Q5T0J7 233 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SYCP2LQ5T4T6 812 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 AP1ARQ63HQ0 302 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 KLC3Q6P597 504 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TSSK4Q6SA08 328 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TBPL2Q6SJ96 375 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 MOXD1Q6UVY6 613 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 UGT2A3Q6UWM9 527 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 ENPP7Q6UWV6 458 aa-2.01□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms