RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.15□□□□□ -0.3
CBX3-203ENST00000409747 SERINC4A6NH21 518 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 TM9SF1O15321 606 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 KLF4O43474 513 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 OIP5O43482 229 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 NTN1O95631 604 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 RNF144AP50876 292 aaPredicted RBP13.14□□□□□ -0.31
CBX3-203ENST00000409747 ABCE1P61221 599 aaKnown RBP13.14□□□□□ -0.31
CBX3-203ENST00000409747 CHI3L2Q15782 390 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 PDZK1Q5T2W1 519 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 C16orf62Q7Z3J2 963 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 C6orf120Q7Z4R8 191 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 WFDC8Q8IUA0 241 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 LRRC34Q8IZ02 419 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 ZNF781Q8N8C0 355 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 OR4A15Q8NGL6 344 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 PERPQ96FX8 193 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 PKNOX2Q96KN3 472 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 BDH2Q9BUT1 245 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 GSX2Q9BZM3 304 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 DPY30Q9C005 99 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 NGBQ9NPG2 151 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 KLHL9Q9P2J3 617 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 RAP2CQ9Y3L5 183 aa13.14□□□□□ -0.31
CBX3-203ENST00000409747 ETV2O00321 342 aaPredicted RBP13.13□□□□□ -0.31
CBX3-203ENST00000409747 EFNA2O43921 213 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 YES1P07947 543 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 IL32P24001 234 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 RAC3P60763 192 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 RPS26P62854 115 aaKnown RBP13.13□□□□□ -0.31
CBX3-203ENST00000409747 QPRTQ15274 297 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 GPR68Q15743 365 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 TOMM34Q15785 309 aaPredicted RBP13.13□□□□□ -0.31
CBX3-203ENST00000409747 ZNF141Q15928 474 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 DPY19L1Q2PZI1 675 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 NDUFAF6Q330K2 333 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 ARHGAP11BQ3KRB8 267 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 ATAD3BQ5T9A4 648 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 ANXA8L1Q5VT79 327 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 OR4F3Q6IEY1 312 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 CLEC9AQ6UXN8 241 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 TFAP2EQ6VUC0 442 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 YTHDF3Q7Z739 585 aaKnown RBP13.13□□□□□ -0.31
CBX3-203ENST00000409747 CLECL1Q8IZS7 167 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 ATP6V1C2Q8NEY4 427 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 NUDT8Q8WV74 236 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 TMEM171Q8WVE6 324 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 TMEM234Q8WY98 164 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 ST8SIA1Q92185 356 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 PLPPR2Q96GM1 343 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 LAT2Q9GZY6 243 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 CXorf56Q9H5V9 222 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 COQ10BQ9H8M1 238 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 AKTIPQ9H8T0 292 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 SERINC1Q9NRX5 453 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 WDR91A4D1P6 747 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 ITM2AO43736 263 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 CSTAP01040 98 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 RPL14P50914 215 aaKnown RBP13.13□□□□□ -0.31
CBX3-203ENST00000409747 CLNS1AP54105 237 aaKnown RBP13.13□□□□□ -0.31
CBX3-203ENST00000409747 LTBQ06643 244 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 SKP2Q13309 424 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 P2RY6Q15077 328 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 EIF3MQ7L2H7 374 aaKnown RBP13.13□□□□□ -0.31
CBX3-203ENST00000409747 TUSC5Q8IXB3 177 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 GABRG1Q8N1C3 465 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 MIPOL1Q8TD10 442 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 TESCQ96BS2 214 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 COX4I2Q96KJ9 171 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 PPP1R36Q96LQ0 422 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 Q96MF0 132 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 TMEM204Q9BSN7 226 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 ZNF350Q9GZX5 532 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 POLE3Q9NRF9 147 aa13.13□□□□□ -0.31
CBX3-203ENST00000409747 PRSS51A0A1B0GVH4 220 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 HS3ST1O14792 307 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 GCM2O75603 506 aaPredicted RBP13.12□□□□□ -0.31
CBX3-203ENST00000409747 HEXAP06865 529 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 GUSBP08236 651 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 PGCP20142 388 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 ZNF844Q08AG5 666 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 ZNF611Q8N823 705 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 SLC25A43Q8WUT9 341 aaPredicted RBP13.12□□□□□ -0.31
CBX3-203ENST00000409747 KISS1RQ969F8 398 aaPredicted RBP13.12□□□□□ -0.31
CBX3-203ENST00000409747 SMR3AQ99954 134 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 OR51I1Q9H343 314 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 SERHL2Q9H4I8 314 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 BCO1Q9HAY6 547 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 SLC35A3Q9Y2D2 325 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 SPIN1Q9Y657 262 aaPredicted RBP13.12□□□□□ -0.31
CBX3-203ENST00000409747 DSCAMO60469 2012 aa13.12□□□□□ -0.31
CBX3-203ENST00000409747 NUP214P35658 2090 aaPredicted RBP13.12□□□□□ -0.31
CBX3-203ENST00000409747 KIAA0513O60268 411 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 DNAJA2O60884 412 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 UGT2B17O75795 530 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 CYP7B1O75881 506 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 PAX1P15863 534 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 ENPP1P22413 925 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 UQCRC2P22695 453 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms