RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 OR6B1O95007 311 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 LYPD3O95274 346 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 HPP00738 406 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 IFNGR2P38484 337 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 TMED10P49755 219 aaKnown RBP11.39□□□□□ -0.59
CHMP3-204ENST00000409727 ZNF691Q5VV52 312 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 C1orf94Q6P1W5 598 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 LYPD8Q6UX82 237 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 IL20RBQ6UXL0 311 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 MBOAT2Q6ZWT7 520 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 ZNF440Q8IYI8 595 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 SIRT6Q8N6T7 355 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 LSMEM1Q8N8F7 131 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 TMEM239Q8WW34 195 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 HGDQ93099 445 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 ZNF524Q96C55 264 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 POLR2J2Q9GZM3 115 aaKnown RBP11.39□□□□□ -0.59
CHMP3-204ENST00000409727 EVA1AQ9H8M9 152 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 GPN2Q9H9Y4 310 aaPredicted RBP11.39□□□□□ -0.59
CHMP3-204ENST00000409727 PCSK5Q92824 1860 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 A0A1W2PQD3 144 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CDRT15L2A8MXV6 281 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 M0R129 80 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 SLC30A4O14863 429 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CHP2O43745 196 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 NGFRP08138 427 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CHMP24386 653 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 OMPP47874 163 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 MEP1AQ16819 746 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 B3GNTL1Q67FW5 361 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 TMEM154Q6P9G4 183 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 ULK3Q6PHR2 472 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 POMZP3Q6PJE2 187 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 TMPRSS7Q7RTY8 843 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 THAP5Q7Z6K1 395 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CACTIN-AS1Q8N1I8 211 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 LINC00471Q8N535 108 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CNIH3Q8TBE1 160 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 OIT3Q8WWZ8 545 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 UBE2FQ969M7 185 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 SLC35B4Q969S0 331 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 SPACA9Q96E40 222 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 DGCR6LQ9BY27 220 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 LAT2Q9GZY6 243 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 DSN1Q9H410 356 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 METTL7AQ9H8H3 244 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 ATP13A2Q9NQ11 1180 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 ASCL3Q9NQ33 180 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 RASSF1Q9NS23 344 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 C20orf141Q9NUB4 165 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 ANKRD10Q9NXR5 420 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 REV1Q9UBZ9 1251 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 FAM186AA6NE01 2351 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 PTPRBP23467 1997 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 A0A1W2PQ72 361 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 DCDC2BA2VCK2 349 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CDC40O60508 579 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 FBXO45P0C2W1 286 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 IFI30P13284 250 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 OSMP13725 252 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 FUT1P19526 365 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CCNA2P20248 432 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CRISP1P54107 249 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 KEAP1Q14145 624 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 PTGES3Q15185 160 aaKnown RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 TOMM34Q15785 309 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CTU2Q2VPK5 515 aaKnown RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 NUP54Q7Z3B4 507 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 VASH2Q86V25 355 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 RPS19BP1Q86WX3 136 aaKnown RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 RAB43Q86YS6 212 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 CCDC71Q8IV32 467 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 PARP8Q8N3A8 854 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 BRIX1Q8TDN6 353 aaKnown RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 GNPDA2Q8TDQ7 276 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 ASB15Q8WXK1 588 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 APOL4Q9BPW4 351 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 DPH1Q9BZG8 443 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 B3GNT4Q9C0J1 378 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 ADNPQ9H2P0 1102 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 EGLN3Q9H6Z9 239 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 EXOSC3Q9NQT5 275 aaKnown RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 NDRG4Q9ULP0 352 aaKnown RBP11.38□□□□□ -0.59
CHMP3-204ENST00000409727 HEATR5AQ86XA9 2040 aa11.38□□□□□ -0.59
CHMP3-204ENST00000409727 FREM2Q5SZK8 3169 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 TNFAIP8O95379 198 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 ICAM2P13598 275 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 NAGAP17050 411 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 CD82P27701 267 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 SSR4P51571 173 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 CD47Q08722 323 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 COL28A1Q2UY09 1125 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 ATP1A1-AS1Q5TC04 95 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 PRAMEF20Q5VT98 475 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 WBP2NLQ6ICG8 309 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 TMEM156Q8N614 296 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 IQCF1Q8N6M8 205 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 TOR1AIP2Q8NFQ8 470 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 B4GALNT2Q8NHY0 566 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 FAM81AQ8TBF8 368 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms