RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CMASQ8NFW8 434 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 NEIL2Q969S2 332 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 QRSL1Q9H0R6 528 aaKnown RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 OBP2AQ9NY56 170 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ATPIF1Q9UII2 106 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 PCM1Q15154 2024 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 H0YAE9 185 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 DLGAP1O14490 977 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 OR7C1O76099 320 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 PRDX6P30041 224 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 UGT2B10P36537 528 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SLC10A2Q12908 348 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 HAS2Q92819 552 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 TBC1D20Q96BZ9 403 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 BORCS6Q96GS4 357 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ZIC5Q96T25 663 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 CDCA3Q99618 268 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 MED20Q9H944 212 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 TEX264Q9Y6I9 313 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 A0A1W2PPV4 95 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 B4DXG7 233 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF749O43361 778 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SSX4O60224 188 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 PTHP01270 115 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 HOXB5P09067 269 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 UCHL1P09936 223 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ALDH3B1P43353 468 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ACTA2P62736 377 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ACTG2P63267 376 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 NKX3-2P78367 333 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 GPR50Q13585 617 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 DCST2Q5T1A1 773 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 FJX1Q86VR8 437 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 TEX26Q8N6G2 289 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 MSANTD3Q96H12 275 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 GPR22Q99680 433 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SEMA4CQ9C0C4 833 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SMOC1Q9H4F8 434 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ZDHHC7Q9NXF8 308 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 PTTG3PQ9NZH4 202 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ONECUT1Q9UBC0 465 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF705FA8MVS1 300 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF705DP0CH99 300 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF705BP0CI00 300 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 HOXD8P13378 290 aaPredicted RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ART1P52961 327 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 AKR1C1Q04828 323 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 TAZQ16635 292 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 TMEM150AQ86TG1 271 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 TMEM185AQ8NFB2 350 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 OR10X1Q8NGY0 326 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 DNAJB8Q8NHS0 232 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 NPY6RQ99463 290 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ASF1BQ9NVP2 202 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 QPCTLQ9NXS2 382 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 GPR83Q9NYM4 423 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 PCDH17O14917 1159 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 PRKRAO75569 313 aaKnown RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 IFNA1P01562 189 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 FCGR2AP12318 317 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 KDELR2P33947 212 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SNRPD2P62316 118 aaKnown RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 TLE1Q04724 770 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 AADACL3Q5VUY0 350 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ANKRD16Q6P6B7 361 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SPARTQ8N0X7 666 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 NAGSQ8N159 534 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 ACOT4Q8N9L9 421 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 CCDC71LQ8N9Z2 235 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 NAT6Q93015 286 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 KIAA0100Q14667 2235 aaKnown RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SERTM2A0A1B0GWG4 89 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 hCG_1809904A0A1W2PP81 198 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 A0A1W2PPE2 198 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 A0A1W2PR64 198 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 LRRC10BA6NIK2 292 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SPDEFO95238 335 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SNAP29O95721 258 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SOX18P35713 384 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 CXCR4P61073 352 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 RPP30P78346 268 aaKnown RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 TMEM205Q6UW68 189 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 PARS2Q7L3T8 475 aaKnown RBP7.89□□□□□ -1.15
SCN9A-203ENST00000409672 SYT13Q7L8C5 426 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 WDR31Q8NA23 367 aa7.89□□□□□ -1.15
SCN9A-203ENST00000409672 NCBP2LA6PVI3 153 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 ATG12O94817 140 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 FAM157BP0CG42 384 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 BDKRB2P30411 391 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 CREB3L1Q96BA8 519 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 PINX1Q96BK5 328 aaKnown RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 NOX3Q9HBY0 568 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 PCDHGA7Q9Y5G6 932 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 A0A096LPE4 126 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 A0A1W2PPZ6 126 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 TMX2-CTNND1H3BSU7 103 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 PRKNO60260 465 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 KIAA0513O60268 411 aa7.88□□□□□ -1.15
SCN9A-203ENST00000409672 CREBL2O60519 120 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-203ENST00000409672 OR10J4P0C629 311 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms