RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 ATP6V1C2Q8NEY4 427 aa12.96□□□□□ -0.33
COPS7B-205ENST00000409295 OR52P1PQ8NH57 321 aa12.96□□□□□ -0.33
COPS7B-205ENST00000409295 ST8SIA1Q92185 356 aa12.96□□□□□ -0.33
COPS7B-205ENST00000409295 PINK1Q9BXM7 581 aa12.96□□□□□ -0.33
COPS7B-205ENST00000409295 A4GALTQ9NPC4 353 aa12.96□□□□□ -0.33
COPS7B-205ENST00000409295 EXOSC3Q9NQT5 275 aaKnown RBP12.96□□□□□ -0.33
COPS7B-205ENST00000409295 VAPAQ9P0L0 249 aa12.96□□□□□ -0.33
COPS7B-205ENST00000409295 SLAMF8Q9P0V8 285 aa12.96□□□□□ -0.33
COPS7B-205ENST00000409295 PRDM4Q9UKN5 801 aa12.96□□□□□ -0.33
COPS7B-205ENST00000409295 IFT52Q9Y366 437 aa12.96□□□□□ -0.33
COPS7B-205ENST00000409295 KDM4EB2RXH2 506 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-205ENST00000409295 PRKCAP17252 672 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 SESN3P58005 492 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 SKP2Q13309 424 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 NFYCQ13952 458 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 CYLC2Q14093 348 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-205ENST00000409295 LIN52Q52LA3 116 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 PRAMEF8Q5VWM4 474 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 PRAMEF7Q5VXH5 474 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 HBMQ6B0K9 141 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 ZNF787Q6DD87 383 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 GTF2IRD2BQ6EKJ0 949 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 HMGN2P46Q86SG4 172 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 DHDDSQ86SQ9 333 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 GTF2IRD2Q86UP8 949 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 KRT73Q86Y46 540 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 LIX1LQ8IVB5 337 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 DPP10Q8N608 796 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 OR2V1Q8NHB1 315 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 BBS10Q8TAM1 723 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 POC1BQ8TC44 478 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 OSTF1Q92882 214 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 INTS12Q96CB8 462 aaKnown RBP12.95□□□□□ -0.34
COPS7B-205ENST00000409295 TMEM19Q96HH6 336 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 REXO5Q96IC2 774 aaKnown RBP12.95□□□□□ -0.34
COPS7B-205ENST00000409295 KLHL15Q96M94 604 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 ZNF317Q96PQ6 595 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-205ENST00000409295 TREX2Q9BQ50 279 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-205ENST00000409295 SFXN3Q9BWM7 321 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 QRSL1Q9H0R6 528 aaKnown RBP12.95□□□□□ -0.34
COPS7B-205ENST00000409295 SLC24A3Q9HC58 644 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 ACER3Q9NUN7 267 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 SLC25A37Q9NYZ2 338 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 CLCF1Q9UBD9 225 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 MCTS1Q9ULC4 181 aaKnown RBP12.95□□□□□ -0.34
COPS7B-205ENST00000409295 ZNF175Q9Y473 711 aa12.95□□□□□ -0.34
COPS7B-205ENST00000409295 CENPVL1A0A0U1RR11 272 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 ADAMDEC1O15204 470 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 CCDC22O60826 627 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 CRHP06850 196 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 FCGR2AP12318 317 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 BMP2P12643 396 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 NID1P14543 1247 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 SLC6A2P23975 617 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 PSMA4P25789 261 aaKnown RBP12.94□□□□□ -0.34
COPS7B-205ENST00000409295 FKBP2P26885 142 aaKnown RBP12.94□□□□□ -0.34
COPS7B-205ENST00000409295 SLC7A1P30825 629 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 SFTPDP35247 375 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 ZNF136P52737 540 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 CDK6Q00534 326 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 MERTKQ12866 999 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 KLF10Q13118 480 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 PON3Q15166 354 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 TOMM34Q15785 309 aaPredicted RBP12.94□□□□□ -0.34
COPS7B-205ENST00000409295 TMEM176BQ3YBM2 270 aaPredicted RBP12.94□□□□□ -0.34
COPS7B-205ENST00000409295 RUNDC3AQ59EK9 446 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 SLC25A53Q5H9E4 307 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 CGB2Q6NT52 195 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 REEP3Q6NUK4 255 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 DLEU7Q6UYE1 221 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 MEX3BQ6ZN04 569 aaKnown RBP12.94□□□□□ -0.34
COPS7B-205ENST00000409295 CPLX4Q7Z7G2 160 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 CNOT9Q92600 299 aaKnown RBP12.94□□□□□ -0.34
COPS7B-205ENST00000409295 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 CGREF1Q99674 301 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 SH3GL1Q99961 368 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 SPOCK3Q9BQ16 436 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 SPATA5L1Q9BVQ7 753 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 NSRP1Q9H0G5 558 aaKnown RBP12.94□□□□□ -0.34
COPS7B-205ENST00000409295 TMEM185BQ9H7F4 350 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 BCL2L10Q9HD36 194 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 SAR1AQ9NR31 198 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 SPIN1Q9Y657 262 aaPredicted RBP12.94□□□□□ -0.34
COPS7B-205ENST00000409295 GMEB1Q9Y692 573 aa12.94□□□□□ -0.34
COPS7B-205ENST00000409295 PHF3Q92576 2039 aaKnown RBP12.93□□□□□ -0.34
COPS7B-205ENST00000409295 CFAP73A6NFT4 308 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 H0YC42 278 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 SYT5O00445 386 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 TNFSF11O14788 317 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 CXCL13O43927 109 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 DNAJA2O60884 412 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 TGM6O95932 706 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 PLGP00747 810 aaPredicted RBP12.93□□□□□ -0.34
COPS7B-205ENST00000409295 NPPAP01160 153 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 THBS1P07996 1170 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 NUDT7P0C024 238 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 PABPC4LP0CB38 370 aaKnown RBP12.93□□□□□ -0.34
COPS7B-205ENST00000409295 HOXB9P17482 250 aaPredicted RBP12.93□□□□□ -0.34
COPS7B-205ENST00000409295 GPX2P18283 190 aa12.93□□□□□ -0.34
COPS7B-205ENST00000409295 RPS4Y1P22090 263 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms