RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CCDC168Q8NDH2 2452 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 PKDREJQ9NTG1 2253 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 RAB19A4D1S5 217 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 ACOD1A6NK06 481 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 LINC00587B1AMM8 73 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 RBBP9O75884 186 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 TGDSO95455 350 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 S100A9P06702 114 aaKnown RBP8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 RFPL3SP0C7P2 107 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 HOXC12P31275 282 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 TLX1P31314 330 aaPredicted RBP8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 MMP16P51512 607 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 CLCQ05315 142 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 DUSP8Q13202 625 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 ART3Q13508 389 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 MPEG1Q2M385 716 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 ZNF791Q3KP31 576 aaPredicted RBP8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 GRAMD1BQ3KR37 738 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 ZFP69Q49AA0 526 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 RUNDC3AQ59EK9 446 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 CCNYL2Q5T2Q4 361 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 BICRALQ6AI39 1079 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 RTL4Q6ZR62 310 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 MTDHQ86UE4 582 aaKnown RBP8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 SLC22A9Q8IVM8 553 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 EID3Q8N140 333 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 CLEC4FQ8N1N0 589 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 METTL4Q8N3J2 472 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 OR5L2Q8NGL0 311 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 NUBPLQ8TB37 319 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 TCP10LQ8TDR4 215 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 SELENOMQ8WWX9 145 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 TMIGD2Q96BF3 282 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 SH3YL1Q96HL8 342 aaPredicted RBP8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 ZDHHC11Q9H8X9 412 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 CXorf21Q9HAI6 301 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 CES1P1Q9UKY3 287 aa8.87□□□□□ -0.99
NIF3L1-202ENST00000409020 A0A0G2JMP0 313 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 SYNDIG1LA6NDD5 238 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 UBFD1O14562 309 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 CTDSP2O14595 271 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 NDUFS6O75380 124 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 NME6O75414 186 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 SUPT7LO94864 414 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 MFN2O95140 757 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 MLYCDO95822 493 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 OTCP00480 354 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 YES1P07947 543 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 SLC35E2P0CK97 266 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 IL12AP29459 219 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 RNF144AP50876 292 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 XKP51811 444 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 CASP6P55212 293 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 FOXA1P55317 472 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 HMGCS1Q01581 520 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 IL1RL1Q01638 556 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 PLGLB1Q02325 96 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 MGAT2Q10469 447 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 GTF3C1Q12789 2109 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 BNIP2Q12982 314 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 PPA1Q15181 289 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 NNATQ16517 81 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 ZNF630Q2M218 657 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 IQCCQ4KMZ1 466 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 ZMAT1Q5H9K5 638 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 SCIMPQ6UWF3 145 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 RPTNQ6XPR3 784 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 RNF111Q6ZNA4 994 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 SH2D5Q6ZV89 423 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 LIX1LQ8IVB5 337 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 GPALPP1Q8IXQ4 340 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 C1orf52Q8N6N3 182 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 ZNF615Q8N8J6 731 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 ZNF441Q8N8Z8 693 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 ANKRD42Q8N9B4 389 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 OR5M9Q8NGP3 310 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 FAM57AQ8TBR7 257 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 FBXW5Q969U6 566 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 TM4SF18Q96CE8 201 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 SPACA9Q96E40 222 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 AKIP1Q9NQ31 210 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 PCDHB16Q9NRJ7 776 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 COA4Q9NYJ1 87 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 PSMC3IPQ9P2W1 217 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 HEY2Q9UBP5 337 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 CHCHD2Q9Y6H1 151 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 EML6Q6ZMW3 1958 aa8.86□□□□□ -0.99
NIF3L1-202ENST00000409020 ATP6AP2A0A1C7CYW4 349 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 LRRC3CA6NJW4 275 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 NPIPA2E9PIF3 369 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 NPIPA3F8WFD2 350 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 G3V2L1 256 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 MANBAO00462 879 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 PRRG2O14669 202 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 ARHGEF9O43307 516 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 ATP6AP2O75787 350 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 AGR2O95994 175 aa8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 HOXD4P09016 255 aaPredicted RBP8.85□□□□□ -0.99
NIF3L1-202ENST00000409020 CPMP14384 443 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms