RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 CIB4A0PJX0 185 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 C7orf72A4D263 438 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ASPDHA6ND91 283 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 PSMD9O00233 223 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 TBX1O43435 398 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 PLOD3O60568 738 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 KCNK2O95069 426 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 RPS5P46782 204 aaKnown RBP8.42□□□□□ -1.06
LIG4-202ENST00000405925 SPHARQ15513 63 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 PROX2Q3B8N5 592 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 TMEM176BQ3YBM2 270 aaPredicted RBP8.42□□□□□ -1.06
LIG4-202ENST00000405925 LIPKQ5VXJ0 399 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 SLC22A10Q63ZE4 541 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 PLEKHG7Q6ZR37 379 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 PTOV1Q86YD1 416 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 RIMKLAQ8IXN7 391 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 UXS1Q8NBZ7 420 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 TM9SF4Q92544 642 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 PMM1Q92871 262 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ZMYND19Q96E35 227 aaPredicted RBP8.42□□□□□ -1.06
LIG4-202ENST00000405925 CCNL2Q96S94 520 aaPredicted RBP8.42□□□□□ -1.06
LIG4-202ENST00000405925 MGLLQ99685 303 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 EGLN3Q9H6Z9 239 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 TAS2R7Q9NYW3 318 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 RNF6Q9Y252 685 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 FARSAQ9Y285 508 aaKnown RBP8.42□□□□□ -1.06
LIG4-202ENST00000405925 HSPE1-MOB4S4R3N1 261 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 B4GAT1O43505 415 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 GYPBP06028 91 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ZNF20P17024 532 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 GGT2P36268 569 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 PPICP45877 212 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 CCL11P51671 97 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 CDK5R2Q13319 367 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ZNF791Q3KP31 576 aaPredicted RBP8.42□□□□□ -1.06
LIG4-202ENST00000405925 TBC1D25Q3MII6 688 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ZNF836Q6ZNA1 936 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 GPR137CQ8N3F9 429 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ZFP41Q8N8Y5 198 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 B3GNT7Q8NFL0 401 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 THOC3Q96J01 351 aaKnown RBP8.42□□□□□ -1.06
LIG4-202ENST00000405925 MROQ9BYG7 248 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 PATJQ8NI35 1801 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 A0A087WV62 115 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 TNFRSF21O75509 655 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 GASTP01350 101 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 F13BP05160 661 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 DPP4P27487 766 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 WNT3P56703 355 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 GPR85P60893 370 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 IDNKQ5T6J7 187 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 LANCL3Q6ZV70 420 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 KRT74Q7RTS7 529 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ZER1Q7Z7L7 766 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ZNF283Q8N7M2 679 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 CHST4Q8NCG5 386 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 OR4D9Q8NGE8 314 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 OR1J4Q8NGS1 313 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 S100ZQ8WXG8 99 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 NKD1Q969G9 470 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 C11orf24Q96F05 449 aaPredicted RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 SH3GL3Q99963 347 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 RPRD1BQ9NQG5 326 aaKnown RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 MED11Q9P086 117 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 TMEM9Q9P0T7 183 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 TMEM14AQ9Y6G1 99 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 RP1P56715 2156 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 PRAMEF25A6NGN4 478 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ITGA10O75578 1167 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ACP2P11117 423 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 POU3F2P20265 443 aaPredicted RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 CHMP24386 653 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ACVR1BP36896 505 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 HTR3AP46098 478 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 CYB561P49447 251 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ACTC1P68032 377 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ACTA1P68133 377 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 TSPAN31Q12999 210 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 GK3PQ14409 553 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 LRFN4Q6PJG9 635 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 OR8K3Q8NH51 312 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 UCN3Q969E3 161 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 HIST1H2AAQ96QV6 131 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 RBM24Q9BX46 236 aaKnown RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 ERVMER34-1Q9H9K5 563 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 POLE3Q9NRF9 147 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 RXFP3Q9NSD7 469 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 TUBA8Q9NY65 449 aaPredicted RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 MALT1Q9UDY8 824 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 A0A075B6Q4 140 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 A0A1W2PPW3 197 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ARGFXA6NJG6 315 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 TFECO14948 347 aaPredicted RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 SLC22A1O15245 554 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ACOX3O15254 700 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ARL6IP5O75915 188 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 H2BFMP0C1H6 154 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ELAVL4P26378 380 aaKnown RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 PEBP1P30086 187 aaKnown RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 SDC2P34741 201 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms