RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SLC13A4Q9UKG4 626 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 SLC6A5Q9Y345 797 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 A0A1B0GTH9 108 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 TMEM229AB2RXF0 380 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 FAAHO00519 579 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 PDE5AO76074 875 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 LGI1O95970 557 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 ACAA2P42765 397 aaKnown RBP26.58■■□□□ 1.84
USP42-202ENST00000404008 GFRA1P56159 465 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 ELOAQ14241 798 aaKnown RBP26.58■■□□□ 1.84
USP42-202ENST00000404008 ARHGAP11AQ6P4F7 1023 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 GFRALQ6UXV0 394 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 FAM162AQ96A26 154 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 CLPTM1LQ96KA5 538 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 NPAS1Q99742 590 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 PCDHAC1Q9H158 963 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 EXO5Q9H790 373 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 KLHL28Q9NXS3 571 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 SPRR3Q9UBC9 169 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 MAGEL2Q9UJ55 1249 aa26.58■■□□□ 1.84
USP42-202ENST00000404008 DNAJC13O75165 2243 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 SHISA8B8ZZ34 492 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 ETV2O00321 342 aaPredicted RBP26.57■■□□□ 1.84
USP42-202ENST00000404008 AQP7O14520 342 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 FESP07332 822 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 PRG2P13727 222 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 ZNF17P17021 662 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 PRKCAP17252 672 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 BNIP2Q12982 314 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 NHSL2Q5HYW2 709 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 RAET1LQ5VY80 246 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 FGD2Q7Z6J4 655 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 GTPBP8Q8N3Z3 284 aaPredicted RBP26.57■■□□□ 1.84
USP42-202ENST00000404008 OR5M1Q8NGP8 315 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 ST8SIA1Q92185 356 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 ARHGDIGQ99819 225 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 EVA1AQ9H8M9 152 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 GORASP2Q9H8Y8 452 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 BAG5Q9UL15 447 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 SNX13Q9Y5W8 968 aa26.57■■□□□ 1.84
USP42-202ENST00000404008 OR2M5A3KFT3 312 aa26.56■■□□□ 1.84
USP42-202ENST00000404008 GMNNO75496 209 aa26.56■■□□□ 1.84
USP42-202ENST00000404008 DNAJC8O75937 253 aaPredicted RBP26.56■■□□□ 1.84
USP42-202ENST00000404008 ME2P23368 584 aa26.56■■□□□ 1.84
USP42-202ENST00000404008 SLC25A53Q5H9E4 307 aa26.56■■□□□ 1.84
USP42-202ENST00000404008 POC1BQ8TC44 478 aa26.56■■□□□ 1.84
USP42-202ENST00000404008 SFXN2Q96NB2 322 aa26.56■■□□□ 1.84
USP42-202ENST00000404008 WFDC6Q9BQY6 131 aa26.56■■□□□ 1.84
USP42-202ENST00000404008 PIGQQ9BRB3 760 aa26.56■■□□□ 1.84
USP42-202ENST00000404008 TNFSF12-TNFSF13A0A0A6YY99 330 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 ARPC2O15144 300 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 ZNHIT1O43257 154 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 NTN1O95631 604 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 SERPINA1P01009 418 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 UQCRBP14927 111 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 CHMP24386 653 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 PSMA4P25789 261 aaKnown RBP26.55■■□□□ 1.84
USP42-202ENST00000404008 EIF1P41567 113 aaKnown RBP26.55■■□□□ 1.84
USP42-202ENST00000404008 IDH2P48735 452 aaKnown RBP26.55■■□□□ 1.84
USP42-202ENST00000404008 ZNF136P52737 540 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 NCALDP61601 193 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 SELENOWP63302 87 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 GABPB1Q06547 395 aaPredicted RBP26.55■■□□□ 1.84
USP42-202ENST00000404008 FOXF1Q12946 379 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 NRF1Q16656 503 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 CBLL1Q75N03 491 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 ZNF563Q8TA94 476 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 TMEM234Q8WY98 164 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 RNF145Q96MT1 663 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 CADM1Q9BY67 442 aaKnown RBP26.55■■□□□ 1.84
USP42-202ENST00000404008 LRMDAQ9H2I8 198 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 ACER3Q9NUN7 267 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 ADPRHL2Q9NX46 363 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 PRDM4Q9UKN5 801 aa26.55■■□□□ 1.84
USP42-202ENST00000404008 OR14I1A6ND48 311 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 GSC2O15499 205 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 WISP1O95388 367 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 GCKP35557 465 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 DLX5P56178 289 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 RGS8P57771 180 aaPredicted RBP26.54■■□□□ 1.84
USP42-202ENST00000404008 SESN3P58005 492 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 HOXC5Q00444 222 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 IGFBP7Q16270 282 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 AAGABQ6PD74 315 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 GALNT11Q8NCW6 608 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 PROX1Q92786 737 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 MRGPRX4Q96LA9 322 aa26.54■■□□□ 1.84
USP42-202ENST00000404008 M0R3H8 397 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 ACTL6AO96019 429 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 BMP7P18075 431 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 ADH6P28332 368 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 CRYZQ08257 329 aaKnown RBP26.53■■□□□ 1.84
USP42-202ENST00000404008 VASNQ6EMK4 673 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 PGM2L1Q6PCE3 622 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 OR10Q1Q8NGQ4 319 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 ABTB1Q969K4 478 aaPredicted RBP26.53■■□□□ 1.84
USP42-202ENST00000404008 TPD52L3Q96J77 140 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 UGT2B28Q9BY64 529 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 MUC13Q9H3R2 512 aa26.53■■□□□ 1.84
USP42-202ENST00000404008 TNFRSF10DQ9UBN6 386 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms