RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 AP1B1Q10567 949 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 NFATC2Q13469 925 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 SNX1Q13596 522 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 CUL1Q13616 776 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 HTR4Q13639 388 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 MORF4L2Q15014 288 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 C3AR1Q16581 482 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 TEX44Q53QW1 395 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 TEX35Q5T0J7 233 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 LYPLAL1Q5VWZ2 237 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 VITQ6UXI7 678 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 TMEM64Q6YI46 380 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 RFPL4BQ6ZWI9 263 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 TMEM25Q86YD3 366 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 IFT20Q8IY31 132 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 METTL4Q8N3J2 472 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 CARNMT1Q8N4J0 409 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 ATPAF2Q8N5M1 289 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 DCAF4L2Q8NA75 395 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 CLEC1AQ8NC01 280 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 BBOF1Q8ND07 529 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 LPCAT1Q8NF37 534 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 OR5M9Q8NGP3 310 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 SPATA3Q8NHX4 192 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 ST7LQ8TDW4 575 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 DDI1Q8WTU0 396 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 FGF14Q92915 247 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 LRRC45Q96CN5 670 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 SPATA13Q96N96 652 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 AGAP4Q96P64 663 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 PPP1R2P1Q96PQ5 205 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 XPO6Q96QU8 1125 aaKnown RBP4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 LGMNQ99538 433 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 PKP2Q99959 881 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 VGLL1Q99990 258 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 FEM1AQ9BSK4 669 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 TMEM121Q9BTD3 319 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 BBS2Q9BXC9 721 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF665Q9H7R5 613 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 PDFQ9HBH1 243 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 IL1RAPQ9NPH3 570 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 GDF3Q9NR23 364 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 FAM114A2Q9NRY5 505 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 NDE1Q9NXR1 346 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 PAK5Q9P286 719 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 THAP10Q9P2Z0 257 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 HPCAL4Q9UM19 191 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 UTP11Q9Y3A2 253 aaKnown RBP4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 MFHAS1Q9Y4C4 1052 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 OR51B4Q9Y5P0 310 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF106Q9H2Y7 1883 aaKnown RBP4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 CEP192Q8TEP8 1941 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 XIRP2A4UGR9 3374 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 IGKV3D-15A0A087WSY6 115 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 A0A0D9SEW6 157 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 FAM149AA5PLN7 773 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 DFFAO00273 331 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 DNALI1O14645 258 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 TRDMT1O14717 391 aaKnown RBP4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 CHUKO15111 745 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 P2RX6O15547 441 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 PSMD3O43242 534 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZMPSTE24O75844 475 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 ANGPTL1O95841 491 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 IFNB1P01574 187 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 CISD3P0C7P0 127 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 CCNB1P14635 433 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 CPA3P15088 417 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 ACKR3P25106 362 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 RPL22P35268 128 aaKnown RBP4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 FDFT1P37268 417 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 CSNK1DP48730 415 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 SGSHP51688 502 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 WASHC5Q12768 1159 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 RUNX3Q13761 415 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 PPP1R7Q15435 360 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 PARP6Q2NL67 630 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 FUT11Q495W5 492 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 MARC1Q5VT66 337 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 DOK6Q6PKX4 331 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 TPGS1Q6ZTW0 290 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 Q7L0L9 218 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF567Q8N184 647 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 BBS5Q8N3I7 341 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 NAT8LQ8N9F0 302 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 CCNYQ8ND76 341 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 PRSS33Q8NF86 280 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 OR52B6Q8NGF0 335 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 OR52K2Q8NGK3 314 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 OR10G7Q8NGN6 311 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 WFDC5Q8TCV5 224 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 GTF3AQ92664 365 aaKnown RBP4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 ISG20Q96AZ6 181 aaKnown RBP4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 MSANTD3Q96H12 275 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 SNF8Q96H20 258 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 CELF6Q96J87 481 aaKnown RBP4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 CABS1Q96KC9 395 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 AGAP3Q96P47 875 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 PSKH2Q96QS6 385 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms