RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ZNF264O43296 627 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 PIAS2O75928 621 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 CER1O95813 267 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 MAMDC2Q7Z304 686 aaPredicted RBP13.02□□□□□ -0.33
SCAF4-202ENST00000399804 CEACAM19Q7Z692 300 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 UBALD2Q8IYN6 164 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 CADM4Q8NFZ8 388 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 CTRCQ99895 268 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.33
SCAF4-202ENST00000399804 CHD5Q8TDI0 1954 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 A0A1W2PS29 197 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 VSTM2BA6NLU5 285 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 HCRTR1O43613 425 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 HTR1AP08908 422 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 SPARCP09486 303 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 FAM53BQ14153 422 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 MLC1Q15049 377 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 FCRL6Q6DN72 434 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 SLC22A16Q86VW1 577 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 RNF113BQ8IZP6 322 aaKnown RBP13.02□□□□□ -0.33
SCAF4-202ENST00000399804 AGBL5Q8NDL9 886 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 LCORQ96JN0 433 aaPredicted RBP13.02□□□□□ -0.33
SCAF4-202ENST00000399804 FCRL1Q96LA6 429 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 MED20Q9H944 212 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 ATP13A2Q9NQ11 1180 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 SIRT3Q9NTG7 399 aaPredicted RBP13.02□□□□□ -0.33
SCAF4-202ENST00000399804 MMACHCQ9Y4U1 282 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 RNF215Q9Y6U7 377 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 TDRD6O60522 2096 aaKnown RBP13.02□□□□□ -0.33
SCAF4-202ENST00000399804 ABCA7Q8IZY2 2146 aa13.02□□□□□ -0.33
SCAF4-202ENST00000399804 CKAP5Q14008 2032 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 IGHV3-20A0A0C4DH32 117 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 AGAP5A6NIR3 686 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 EIF1AYO14602 144 aaKnown RBP13.01□□□□□ -0.33
SCAF4-202ENST00000399804 KHDRBS3O75525 346 aaKnown RBP13.01□□□□□ -0.33
SCAF4-202ENST00000399804 ACP2P11117 423 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 GLB1P16278 677 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 HNRNPFP52597 415 aaKnown RBP13.01□□□□□ -0.33
SCAF4-202ENST00000399804 SGCBQ16585 318 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 PLEKHG7Q6ZR37 379 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 RABEPKQ7Z6M1 372 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 OR6N1Q8NGY5 312 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 OR2AJ1Q8NGZ0 328 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 SLC46A1Q96NT5 459 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 CNN2Q99439 309 aaKnown RBP13.01□□□□□ -0.33
SCAF4-202ENST00000399804 CDX2Q99626 313 aaPredicted RBP13.01□□□□□ -0.33
SCAF4-202ENST00000399804 GPATCH2Q9NW75 528 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 ALKBH4Q9NXW9 302 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 A0A1B0GX78 115 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 LILRA5A6NI73 299 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 H3BML4 177 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 PRKYO43930 277 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 PIP5K1CO60331 668 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 ITGA10O75578 1167 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 IGHV4-34P06331 123 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 LTBRP36941 435 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 MNDAP41218 407 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 SLC6A8P48029 635 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 PRPS1P60891 318 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 COL13A1Q5TAT6 717 aaPredicted RBP13.01□□□□□ -0.33
SCAF4-202ENST00000399804 TSLPQ969D9 159 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 OR5M11Q96RB7 305 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 BCL7BQ9BQE9 202 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 RHNO1Q9BSD3 238 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 ALG8Q9BVK2 526 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 TMEM185BQ9H7F4 350 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 NCDNQ9UBB6 729 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 KCNK2O95069 426 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 PEPDP12955 493 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 EMP3P54852 163 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 PRAMEF17Q5VTA0 474 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 WBP2NLQ6ICG8 309 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 RAB43Q86YS6 212 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 GPR32P1Q8NGA4 272 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 OR14A16Q8NHC5 309 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 DUSP21Q9H596 190 aa13.01□□□□□ -0.33
SCAF4-202ENST00000399804 TRBV2A0A0J9YWF9 115 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 EFCAB7A8K855 629 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 ZNF879B4DU55 563 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 SEC14L2O76054 403 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 PTPN6P29350 595 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 DCAF7P61962 342 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 ACSM5Q6NUN0 579 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 UBE2Q1Q7Z7E8 422 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 LACC1Q8IV20 430 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 IL22RA1Q8N6P7 574 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 C16orf52Q8NHV5 167 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 TRBV11-1A0A0K0K1C0 115 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 BRINP1O60477 761 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 MAP3K8P41279 467 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 DCDP81605 110 aaKnown RBP13□□□□□ -0.33
SCAF4-202ENST00000399804 E2F2Q14209 437 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 SEC23BQ15437 767 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 PAPD4Q6PIY7 484 aaKnown RBP13□□□□□ -0.33
SCAF4-202ENST00000399804 DHRS4L2Q6PKH6 230 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 MCEMP1Q8IX19 187 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 CENPSQ8N2Z9 138 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 ZBTB8BQ8NAP8 495 aaPredicted RBP13□□□□□ -0.33
SCAF4-202ENST00000399804 OR2T4Q8NH00 348 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 OR8K3Q8NH51 312 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms