RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 SUCNR1Q9BXA5 334 aa10.3□□□□□ -0.76
ITSN1-207ENST00000399338 TEX101Q9BY14 249 aa10.3□□□□□ -0.76
ITSN1-207ENST00000399338 POLR2J3Q9H1A7 115 aaKnown RBP10.3□□□□□ -0.76
ITSN1-207ENST00000399338 PRO1933Q9H354 126 aa10.3□□□□□ -0.76
ITSN1-207ENST00000399338 TMEM185BQ9H7F4 350 aa10.3□□□□□ -0.76
ITSN1-207ENST00000399338 TUBA4BQ9H853 241 aa10.3□□□□□ -0.76
ITSN1-207ENST00000399338 TMEM138Q9NPI0 162 aa10.3□□□□□ -0.76
ITSN1-207ENST00000399338 DDIT4Q9NX09 232 aa10.3□□□□□ -0.76
ITSN1-207ENST00000399338 GAR1Q9NY12 217 aaKnown RBP10.3□□□□□ -0.76
ITSN1-207ENST00000399338 PTGFRNQ9P2B2 879 aa10.3□□□□□ -0.76
ITSN1-207ENST00000399338 RNF13O43567 381 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 PCDH8O95206 1070 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 USP17L7P0C7H9 530 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 IQCF3P0C7M6 154 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 OR8G3PP0DMU2 310 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 TBXA2RP21731 343 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 GABRR2P28476 465 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 S100A2P29034 98 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 STAT5AP42229 794 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 MTNR1AP48039 350 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 NRG3P56975 720 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 SRSF11Q05519 484 aaKnown RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ALG11Q2TAA5 492 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ZNF783Q6ZMS7 281 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ESPNLQ6ZVH7 1005 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 BBS10Q8TAM1 723 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ROBO4Q8WZ75 1007 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 FUBP3Q96I24 572 aaKnown RBP eCLIP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ELF4Q99607 663 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ALG8Q9BVK2 526 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 CCDC86Q9H6F5 360 aaKnown RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 TMEM100Q9NV29 134 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 FAM120CQ9NX05 1096 aaKnown RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 CORO2BQ9UQ03 480 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 KCNIP3Q9Y2W7 256 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 LTBP4Q8N2S1 1624 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 IGKV6D-21A0A0A0MT36 114 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 TMEM272A0A1B0GTI8 110 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 TMEM238LA0A1B0GVL6 79 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 NDUFB6O95139 128 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 FARS2O95363 451 aaKnown RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 LMO2P25791 158 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ADH6P28332 368 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 OPRD1P41143 372 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 CASP9P55211 416 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 TGIF1Q15583 401 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 PTPRNQ16849 979 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ARMC12Q5T9G4 340 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 SDHAF4Q5VUM1 108 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 CXorf57Q6NSI4 855 aaKnown RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ACSM5Q6NUN0 579 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 TSSK4Q6SA08 328 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 SBSNQ6UWP8 590 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 VITQ6UXI7 678 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ANKRD33Q7Z3H0 272 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 HORMAD2Q8N7B1 307 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 UBAC2Q8NBM4 344 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 SDR9C7Q8NEX9 313 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 TFGQ92734 400 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 RAB24Q969Q5 203 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 R3HDM4Q96D70 268 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 LRIG1Q96JA1 1093 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 LRFN5Q96NI6 719 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 NMRK2Q9NPI5 230 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 SIRT7Q9NRC8 400 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 MMP26Q9NRE1 261 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 GPATCH2Q9NW75 528 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 MBD1Q9UIS9 605 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 SLC35A3Q9Y2D2 325 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 UBE2QL1A1L167 161 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 ZNF705EA8MWA4 302 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 SH3BGRLO75368 114 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 RAB3DO95716 219 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 PDYNP01213 254 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 TYRP1P17643 537 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 USF2Q15853 346 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 LRRTM1Q86UE6 522 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 C1QL4Q86Z23 238 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 HJURPQ8NCD3 748 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 OR4D9Q8NGE8 314 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 OR8J2Q8NGG1 315 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 SPRYD4Q8WW59 207 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-207ENST00000399338 PCYT2Q99447 389 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 SMOC1Q9H4F8 434 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 PCDHB1Q9Y5F3 818 aa10.29□□□□□ -0.76
ITSN1-207ENST00000399338 LOC730098B7Z3J9 87 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 FFAR2O15552 330 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 OR10H2O60403 315 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 KLHL18O94889 574 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 SERPIND1P05546 499 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 SNRPCP09234 159 aaKnown RBP10.28□□□□□ -0.76
ITSN1-207ENST00000399338 UCHL1P09936 223 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 RPS2P15880 293 aaKnown RBP10.28□□□□□ -0.76
ITSN1-207ENST00000399338 PRPS1L1P21108 318 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 PRPH2P23942 346 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 MSX1P28360 303 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 AGTR1P30556 359 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 LIM2P55344 173 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 CDK6Q00534 326 aa10.28□□□□□ -0.76
ITSN1-207ENST00000399338 RSU1Q15404 277 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms