RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 LYRM4Q9HD34 91 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 RANGRFQ9HD47 186 aaPredicted RBP17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ISYNA1Q9NPH2 558 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TNFRSF10DQ9UBN6 386 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SHISA3A0PJX4 238 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CDHR4A6H8M9 788 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 UNC119BA6NIH7 251 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 C2orf74A8MZ97 194 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DVL2O14641 736 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR7A10O76100 309 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GPR75O95800 540 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DBIP07108 87 aaKnown RBP17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MLLT3P42568 568 aaPredicted RBP17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 FZD5Q13467 585 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DDI2Q5TDH0 399 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 KLHL36Q8N4N3 616 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ZNF614Q8N883 585 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CDRT4Q8N9R6 151 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 NLGN4YQ8NFZ3 816 aaPredicted RBP17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 LRRC20Q8TCA0 184 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HMGB4Q8WW32 186 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GON7Q9BXV9 100 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MCOLN1Q9GZU1 580 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 IL21RQ9HBE5 538 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MED17Q9NVC6 651 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 EXOGQ9Y2C4 368 aaKnown RBP17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TYRP1P17643 537 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 AKT2P31751 481 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 PLAURQ03405 335 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ADAM15Q13444 863 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TOR2AQ5JU69 321 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 FCRLBQ6BAA4 426 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CD200R1LQ6Q8B3 271 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CSNK1A1LQ8N752 337 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SLC37A2Q8TED4 501 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CD180Q99467 661 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ZNF223Q9UK11 482 aaPredicted RBP17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 NUP50Q9UKX7 468 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TEX51A0A1B0GUA7 166 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 C2orf92A0A1B0GVN3 265 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CD8B2A6NJW9 211 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 PLOD3O60568 738 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ZNF780AO75290 641 aaPredicted RBP16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 IGHA1P01876 353 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HMGN1P05114 100 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CD8BP10966 210 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ICAM2P13598 275 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 RPS4Y1P22090 263 aaKnown RBP16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MGAT2Q10469 447 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 UBE2J2Q8N2K1 259 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GRHL3Q8TE85 626 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MED18Q9BUE0 208 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 KRCC1Q9NPI7 259 aaPredicted RBP16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DIABLOQ9NR28 239 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DUSP22Q9NRW4 184 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CLDND1Q9NY35 253 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SPACA6W5XKT8 324 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TFECO14948 347 aaPredicted RBP16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 AKAP8O43823 692 aaKnown RBP16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GALR3O60755 368 aaPredicted RBP16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GABRG2P18507 467 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 FGF9P31371 208 aaPredicted RBP16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 C1orf61Q13536 156 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 VASNQ6EMK4 673 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 THSD4Q6ZMP0 1018 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ZNF517Q6ZMY9 492 aaPredicted RBP16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MARCH9Q86YJ5 346 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CA13Q8N1Q1 262 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ARIH2OSQ8N7S6 290 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GAS2L1Q99501 681 aaPredicted RBP16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ZNF304Q9HCX3 659 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 FAM60AQ9NP50 221 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MSRAQ9UJ68 235 aa16.99■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TRDV1A0A1B0GX56 115 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GABRPO00591 440 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 RDH16O75452 317 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 LYPD3O95274 346 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 KLHL12Q53G59 568 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR13C2Q8NGS9 318 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SETD6Q8TBK2 473 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GIMAP1Q8WWP7 306 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HS6ST2Q96MM7 605 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MALT1Q9UDY8 824 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 PCDHGB2Q9Y5G2 931 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 A0A087WV62 115 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 LEUTXA8MZ59 168 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 BHLHE40O14503 412 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CSF3P09919 207 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 PSKH1P11801 424 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 BMP7P18075 431 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TBXA2RP21731 343 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 PAICSP22234 425 aaKnown RBP16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TMEM44Q2T9K0 475 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 EXOSC6Q5RKV6 272 aaKnown RBP16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 PDZK1Q5T2W1 519 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ZNF322Q6U7Q0 402 aaPredicted RBP16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR52L1Q8NGH7 329 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 NEIL3Q8TAT5 605 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CCDC3Q9BQI4 270 aa16.98■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MMP28Q9H239 520 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms