RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF136P52737 540 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 DSCR4P56555 118 aaPredicted RBP21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 ARSKQ6UWY0 536 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 RANBP3LQ86VV4 465 aaPredicted RBP21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 ZNF563Q8TA94 476 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 SLC47A1Q96FL8 570 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 TAAR6Q96RI8 345 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 SEPHS2Q99611 448 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 UGT2B28Q9BY64 529 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 UBQLN3Q9H347 655 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 PIEZO2Q9H5I5 2752 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 TRAPPC6AO75865 159 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 ZNF24P17028 368 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 MAGEA5P43359 124 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 IDH2P48735 452 aaKnown RBP21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 KCNC4Q03721 635 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 CCNIQ14094 377 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 GANABQ14697 944 aaKnown RBP21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 QPRTQ15274 297 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 TOMM34Q15785 309 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 NPTX1Q15818 432 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 RNFT1Q5M7Z0 435 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 RSRC1Q96IZ7 334 aaKnown RBP21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 MCHR1Q99705 422 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 PRR14Q9BWN1 585 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 MED17Q9NVC6 651 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 TAS2R10Q9NYW0 307 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 TESQ9UGI8 421 aaKnown RBP21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 ANAPC2Q9UJX6 822 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 VDAC3Q9Y277 283 aa21.44■■□□□ 1.02
TSPAN4-203ENST00000397397 TCRBV3S1A0A5B6 114 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 TFECO14948 347 aaPredicted RBP21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 IFNW1P05000 195 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 HK1P19367 917 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 TCEA1P23193 301 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 SRD5A2P31213 254 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 COPZ1P61923 177 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 KPNB1Q14974 876 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 DEF8Q6ZN54 512 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 CADM2Q8N3J6 435 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 FAM109AQ8N4B1 249 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 ZNF559Q9BR84 538 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 AMBRA1Q9C0C7 1298 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 NTNG1Q9Y2I2 539 aa21.43■■□□□ 1.02
TSPAN4-203ENST00000397397 A0A087WZY1 265 aa21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 DHRS12A0PJE2 317 aa21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 FAAHO00519 579 aa21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 SEMG1P04279 462 aa21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 UMPSP11172 480 aa21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 ALDH6A1Q02252 535 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 CHRNB3Q05901 458 aa21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 PLPPR5Q32ZL2 321 aa21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 FAM98BQ52LJ0 330 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 ADGRG5Q8IZF4 528 aa21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 QPCTLQ9NXS2 382 aa21.42■■□□□ 1.02
TSPAN4-203ENST00000397397 TPST2O60704 377 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 CRYABP02511 175 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 GPIP06744 558 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 GP1BBP13224 206 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 PSMA4P25789 261 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 HTR2AP28223 471 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 ACTR3P61158 418 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 FAM180AQ6UWF9 173 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 YRDCQ86U90 279 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 ZNF843Q8N446 348 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 FAM83FQ8NEG4 500 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 OR14L1PQ8NHC6 308 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 CANT1Q8WVQ1 401 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 TMEM234Q8WY98 164 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 ZNF524Q96C55 264 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 TRIM2Q9C040 744 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 OR2B2Q9GZK3 357 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 DEFB127Q9H1M4 99 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 DENND2DQ9H6A0 471 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 MAGIXQ9H6Y5 334 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 TMEM27Q9HBJ8 222 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 CTPS2Q9NRF8 586 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 RPS6KB2Q9UBS0 482 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 AURKCQ9UQB9 309 aa21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 RPH3AQ9Y2J0 694 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-203ENST00000397397 CPSF4LA6NMK7 179 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 hCG_2039718K7EN88 272 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 ZIC3O60481 467 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 FMO6PO60774 539 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 HPNP05981 417 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 CELA3AP09093 270 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 SESN3P58005 492 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 SLC10A1Q14973 349 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 OR1Q1Q15612 314 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 ENTPD8Q5MY95 495 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 WBP2NLQ6ICG8 309 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 PLEKHM3Q6ZWE6 761 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 CISD2Q8N5K1 135 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 ST8SIA1Q92185 356 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 ZBTB8AQ96BR9 441 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 C7orf34Q96L11 122 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 ACER3Q9NUN7 267 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 MRPS18CQ9Y3D5 142 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 FREM3P0C091 2139 aa21.4■■□□□ 1.02
TSPAN4-203ENST00000397397 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms