RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ADGRG7Q96K78 797 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 TEX37Q96LM6 180 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 SERHL2Q9H4I8 314 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 EXOSC3Q9NQT5 275 aaKnown RBP12.52□□□□□ -0.41
SEC13-204ENST00000397099 SERINC1Q9NRX5 453 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 RASSF1Q9NS23 344 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.52□□□□□ -0.41
SEC13-204ENST00000397099 DNAJB12Q9NXW2 375 aaKnown RBP12.52□□□□□ -0.41
SEC13-204ENST00000397099 GALNT8Q9NY28 637 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 CALML5Q9NZT1 146 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 MKLN1Q9UL63 735 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 SPIN1Q9Y657 262 aaPredicted RBP12.52□□□□□ -0.41
SEC13-204ENST00000397099 HEATR5AQ86XA9 2040 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 FAM234BA2RU67 622 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 TMEM247A6NEH6 219 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 ZNF195O14628 629 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 CASKO14936 926 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 FCMRO60667 390 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 SS18L1O75177 396 aaPredicted RBP12.51□□□□□ -0.41
SEC13-204ENST00000397099 SMNDC1O75940 238 aaKnown RBP eCLIP12.51□□□□□ -0.41
SEC13-204ENST00000397099 ANP32DO95626 131 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 NTN1O95631 604 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 UQCRBP14927 111 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 PRKCAP17252 672 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 KIR2DL2P43627 348 aaPredicted RBP12.51□□□□□ -0.41
SEC13-204ENST00000397099 POLR2JP52435 117 aaKnown RBP12.51□□□□□ -0.41
SEC13-204ENST00000397099 MAP2K6P52564 334 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 NME5P56597 212 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 SKP2Q13309 424 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 GUSBP1Q15486 140 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 CTU2Q2VPK5 515 aaKnown RBP12.51□□□□□ -0.41
SEC13-204ENST00000397099 GPAT3Q53EU6 434 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 TYW3Q6IPR3 259 aaKnown RBP12.51□□□□□ -0.41
SEC13-204ENST00000397099 C3orf33Q6P1S2 294 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 LRRC74BQ6ZQY2 392 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 STK32CQ86UX6 486 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 SLC43A2Q8N370 569 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 SLC25A43Q8WUT9 341 aaPredicted RBP12.51□□□□□ -0.41
SEC13-204ENST00000397099 CCDC28BQ9BUN5 200 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 POLDIP3Q9BY77 421 aaKnown RBP12.51□□□□□ -0.41
SEC13-204ENST00000397099 RAD21L1Q9H4I0 556 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 MTHFD2LQ9H903 347 aaPredicted RBP12.51□□□□□ -0.41
SEC13-204ENST00000397099 TCF7L2Q9NQB0 619 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 INTS9Q9NV88 658 aaKnown RBP12.51□□□□□ -0.41
SEC13-204ENST00000397099 PROCRQ9UNN8 238 aa12.51□□□□□ -0.41
SEC13-204ENST00000397099 NPIPA5A0A0B4J1W7 369 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 SH3D21A4FU49 640 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 SHISA8B8ZZ34 492 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 NPIPA7E9PJI5 369 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 H0YC42 278 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 HMGN4O00479 90 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 TNFSF11O14788 317 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 NPIPA8P0DM63 369 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 H2AFXP16104 143 aaPredicted RBP12.5□□□□□ -0.41
SEC13-204ENST00000397099 IL12AP29459 219 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 SLC7A1P30825 629 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 CD79BP40259 229 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 HTR3AP46098 478 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 CCR4P51679 360 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 ART1P52961 327 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 TPD52P55327 224 aaPredicted RBP12.5□□□□□ -0.41
SEC13-204ENST00000397099 RAC3P60763 192 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 FOXF1Q12946 379 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 QPRTQ15274 297 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 FBXW10Q5XX13 1052 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 FRRS1Q6ZNA5 592 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 RNF130Q86XS8 419 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 CLEC4FQ8N1N0 589 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 FAM71CQ8NEG0 241 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 FBXO27Q8NI29 283 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 POC1BQ8TC44 478 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 ZFP90Q8TF47 636 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 NRGNQ92686 78 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 OSTF1Q92882 214 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 GPATCH1Q9BRR8 931 aaKnown RBP12.5□□□□□ -0.41
SEC13-204ENST00000397099 SIKE1Q9BRV8 207 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 THUMPD3Q9BV44 507 aaKnown RBP12.5□□□□□ -0.41
SEC13-204ENST00000397099 CLEC4MQ9H2X3 399 aaPredicted RBP12.5□□□□□ -0.41
SEC13-204ENST00000397099 RABEP2Q9H5N1 569 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 CACYBPQ9HB71 228 aaKnown RBP12.5□□□□□ -0.41
SEC13-204ENST00000397099 PLSCR4Q9NRQ2 329 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 ZNF226Q9NYT6 803 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 P2RX2Q9UBL9 471 aa12.5□□□□□ -0.41
SEC13-204ENST00000397099 A0A0J9YW62 118 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 CXCL13O43927 109 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 H6PDO95479 791 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 CGAP01215 116 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 DBIP07108 87 aaKnown RBP12.49□□□□□ -0.41
SEC13-204ENST00000397099 UBTFL6P0CB48 400 aaPredicted RBP12.49□□□□□ -0.41
SEC13-204ENST00000397099 NR2F1P10589 423 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 POU2F1P14859 743 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 CD1EP15812 388 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 PPP3CBP16298 524 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 DNAJA1P31689 397 aaKnown RBP12.49□□□□□ -0.41
SEC13-204ENST00000397099 CPOXP36551 454 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 PGM1P36871 562 aa12.49□□□□□ -0.41
SEC13-204ENST00000397099 APOBEC1P41238 236 aaKnown RBP12.49□□□□□ -0.41
SEC13-204ENST00000397099 CLK1P49759 484 aaKnown RBP12.49□□□□□ -0.41
SEC13-204ENST00000397099 KCNJ10P78508 379 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms