RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 RAB15P59190 212 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 YOD1Q5VVQ6 348 aaPredicted RBP13.77□□□□□ -0.21
CBX3-202ENST00000396386 KIRREL2Q6UWL6 708 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 Q6ZNX1 250 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 CPOQ8IVL8 374 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 TMEM151BQ8IW70 566 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 PHC2Q8IXK0 858 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 ZNF440Q8IYI8 595 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 SLC43A2Q8N370 569 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 ZNF527Q8NB42 609 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 BBS1Q8NFJ9 593 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 SLC46A1Q96NT5 459 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 IFT27Q9BW83 186 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 C6orf62Q9GZU0 229 aaPredicted RBP13.77□□□□□ -0.21
CBX3-202ENST00000396386 ZNF304Q9HCX3 659 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 SOCS6O14544 535 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 RFPL3O75679 317 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 TSPAN19P0C672 248 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 RORAP35398 523 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 SLC1A3P43003 542 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 DHPSP49366 369 aaPredicted RBP13.76□□□□□ -0.21
CBX3-202ENST00000396386 GPR143P51810 404 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 RGS21Q2M5E4 152 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 NDUFAF6Q330K2 333 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 ARHGAP40Q5TG30 622 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 LIPKQ5VXJ0 399 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 NIPAL3Q6P499 406 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 BTLAQ7Z6A9 289 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 LSRQ86X29 649 aaPredicted RBP13.76□□□□□ -0.21
CBX3-202ENST00000396386 SLITRK4Q8IW52 837 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 EFHD2Q96C19 240 aaPredicted RBP13.76□□□□□ -0.21
CBX3-202ENST00000396386 CDADC1Q9BWV3 514 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 OR8D2Q9GZM6 311 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 HOXD1Q9GZZ0 328 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 ZNF768Q9H5H4 540 aaKnown RBP13.76□□□□□ -0.21
CBX3-202ENST00000396386 SERTAD3Q9UJW9 196 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 SSR3Q9UNL2 185 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 BAIAP2Q9UQB8 552 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 EXOGQ9Y2C4 368 aaKnown RBP13.76□□□□□ -0.21
CBX3-202ENST00000396386 SPIN1Q9Y657 262 aaPredicted RBP13.76□□□□□ -0.21
CBX3-202ENST00000396386 TRAV27A0A087WT01 109 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 A0A1B0GX78 115 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 SYNDIG1LA6NDD5 238 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 A8MUA0 341 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 IGHA1P01876 353 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 LIMS3P0CW19 117 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 LIMS4P0CW20 117 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 EPHA8P29322 1005 aaPredicted RBP13.76□□□□□ -0.21
CBX3-202ENST00000396386 CRYBB2P43320 205 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 PPICP45877 212 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 ITGADQ13349 1161 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 ELAVL1Q15717 326 aaKnown RBP13.76□□□□□ -0.21
CBX3-202ENST00000396386 OR2G6Q5TZ20 316 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 PRAMEF17Q5VTA0 474 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 PLBD1Q6P4A8 553 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 TSSK4Q6SA08 328 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 THSD4Q6ZMP0 1018 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 ZNF321PQ8N8H1 164 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 ZSCAN1Q8NBB4 408 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 OR4C3Q8NH37 302 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 OTULINQ96BN8 352 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 CLIP3Q96DZ5 547 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 NUDT22Q9BRQ3 303 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 JAM3Q9BX67 310 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 MKKSQ9NPJ1 570 aaPredicted RBP13.76□□□□□ -0.21
CBX3-202ENST00000396386 CMC2Q9NRP2 79 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 CLCA3PQ9Y6N3 262 aa13.76□□□□□ -0.21
CBX3-202ENST00000396386 CCDC163A0A0D9SF12 145 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 FRG2CA6NGY1 282 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 FAM183AA6NL82 134 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 SULT1C4O75897 302 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 IL33O95760 270 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 NGFRP08138 427 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 HOXA6P31267 233 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 SLC6A6P31641 620 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 S100A5P33763 92 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 COPZ1P61923 177 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 CRYZQ08257 329 aaKnown RBP13.75□□□□□ -0.21
CBX3-202ENST00000396386 KLHL26Q53HC5 615 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 SLC35F1Q5T1Q4 408 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 ARMC4Q5T2S8 1044 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 TUBA3EQ6PEY2 450 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 LINC00114Q6XXX2 140 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 OAFQ86UD1 273 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 GATAD2AQ86YP4 633 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 FAM71CQ8NEG0 241 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 OR4F15Q8NGB8 312 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 SLC2A12Q8TD20 617 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 CHPT1Q8WUD6 406 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 DNAJA4Q8WW22 397 aaPredicted RBP13.75□□□□□ -0.21
CBX3-202ENST00000396386 UFD1Q92890 307 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 ZNF501Q96CX3 271 aaPredicted RBP13.75□□□□□ -0.21
CBX3-202ENST00000396386 ART5Q96L15 291 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 LMF1Q96S06 567 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 ASPNQ9BXN1 380 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 PRDM6Q9NQX0 595 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 FGF21Q9NSA1 209 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms