RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 DUSP22Q9NRW4 184 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 NPAP1Q9NZP6 1156 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 CDC42EP3Q9UKI2 254 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 ACTL7BQ9Y614 415 aa18.68■□□□□ 0.58
TRAF4-203ENST00000394925 NUP214P35658 2090 aaPredicted RBP18.68■□□□□ 0.58
TRAF4-203ENST00000394925 A0A096LNT2 108 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 H3BNH8 94 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 SUMO3P55854 103 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-203ENST00000394925 IRX1P78414 480 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-203ENST00000394925 RASGEF1BQ0VAM2 473 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 WHAMMP3Q1A5X7 153 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 TMEM249Q2WGJ8 235 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 RFTN2Q52LD8 501 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-203ENST00000394925 TIMM23BQ5SRD1 257 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.67■□□□□ 0.581e-8■■■□□ 18
TRAF4-203ENST00000394925 Q6ZSR9 355 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 OR10H5Q8NGA6 315 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 RFWD2Q8NHY2 731 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 ZNF524Q96C55 264 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 ZNF300Q96RE9 604 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-203ENST00000394925 STACQ99469 402 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 CACNG6Q9BXT2 260 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 ANKZF1Q9H8Y5 726 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 SIRT3Q9NTG7 399 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-203ENST00000394925 PSMC3IPQ9P2W1 217 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-203ENST00000394925 FIS1Q9Y3D6 152 aa18.67■□□□□ 0.58
TRAF4-203ENST00000394925 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRAF4-203ENST00000394925 A0A1W2PPM1 405 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 RIPK2O43353 540 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 GLRA3O75311 464 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 PROCP04070 461 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 GGT1P19440 569 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 IGHV1-2P23083 117 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 DNAJB13P59910 316 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 RPL38P63173 70 aaKnown RBP18.66■□□□□ 0.58
TRAF4-203ENST00000394925 SELENBP1Q13228 472 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 CDC73Q6P1J9 531 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 CLEC2AQ6UVW9 174 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 PIAS4Q8N2W9 510 aaPredicted RBP18.66■□□□□ 0.58
TRAF4-203ENST00000394925 ZNF614Q8N883 585 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 MZB1Q8WU39 189 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 HTRA1Q92743 480 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 MRGPRX4Q96LA9 322 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 TNFRSF13CQ96RJ3 184 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 KCNK17Q96T54 332 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 HOXD1Q9GZZ0 328 aa18.66■□□□□ 0.58
TRAF4-203ENST00000394925 SMAD9O15198 467 aaKnown RBP18.65■□□□□ 0.58
TRAF4-203ENST00000394925 CYTIPO60759 359 aa18.65■□□□□ 0.58
TRAF4-203ENST00000394925 DCST2Q5T1A1 773 aa18.65■□□□□ 0.58
TRAF4-203ENST00000394925 TRMT10CQ7L0Y3 403 aaKnown RBP18.65■□□□□ 0.58
TRAF4-203ENST00000394925 ZNF100Q8IYN0 542 aa18.65■□□□□ 0.58
TRAF4-203ENST00000394925 TMCO5AQ8N6Q1 288 aa18.65■□□□□ 0.58
TRAF4-203ENST00000394925 OR5B2Q96R09 309 aa18.65■□□□□ 0.58
TRAF4-203ENST00000394925 BEX2Q9BXY8 128 aa18.65■□□□□ 0.58
TRAF4-203ENST00000394925 POU2F3Q9UKI9 436 aa18.65■□□□□ 0.58
TRAF4-203ENST00000394925 KCNE3Q9Y6H6 103 aa18.65■□□□□ 0.58
TRAF4-203ENST00000394925 E7EQL1 145 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 AZIN1O14977 448 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 F12P00748 615 aaPredicted RBP18.64■□□□□ 0.57
TRAF4-203ENST00000394925 LINC00032P0C843 101 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 NEFHP12036 1026 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 COX5AP20674 150 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 TTKP33981 857 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 CCR4P51679 360 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 ATP12AP54707 1039 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 DSCR9P59020 149 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 MLC1Q15049 377 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 QPRTQ15274 297 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 GALNTL6Q49A17 601 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 ARL13AQ5H913 290 aaPredicted RBP18.64■□□□□ 0.57
TRAF4-203ENST00000394925 C11orf71Q6IPW1 123 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 R3HCC1LQ7Z5L2 792 aaKnown RBP18.64■□□□□ 0.57
TRAF4-203ENST00000394925 P2RY8Q86VZ1 359 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 CCDC63Q8NA47 563 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 ADAMTS15Q8TE58 950 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 ZNF75CPQ92670 426 aaPredicted RBP18.64■□□□□ 0.57
TRAF4-203ENST00000394925 MTERF3Q96E29 417 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 RADILQ96JH8 1075 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 ACTRT3Q9BYD9 372 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 TUBB1Q9H4B7 451 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 CBLN4Q9NTU7 201 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 OXSMQ9NWU1 459 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 DTNAQ9Y4J8 743 aa18.64■□□□□ 0.57
TRAF4-203ENST00000394925 OR5H1A6NKK0 313 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 ZNF724A8MTY0 619 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 PLIN3O60664 434 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 PGM3O95394 542 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 H6PDO95479 791 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 ASMTP46597 345 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 CCT3P49368 545 aaKnown RBP18.63■□□□□ 0.57
TRAF4-203ENST00000394925 CASP9P55211 416 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 VLDLRP98155 873 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 LOXL1Q08397 574 aaPredicted RBP18.63■□□□□ 0.57
TRAF4-203ENST00000394925 TP53BP2Q13625 1128 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 RAB35Q15286 201 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 CCDC153Q494R4 210 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 SLC25A53Q5H9E4 307 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 SLC22A25Q6T423 547 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 SSX8Q7RTT4 187 aa18.63■□□□□ 0.57
TRAF4-203ENST00000394925 GALNT5Q7Z7M9 940 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms