RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CHST5Q9GZS9 411 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 HRH4Q9H3N8 390 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 GAR1Q9NY12 217 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 CBLCQ9ULV8 474 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 ANK1P16157 1881 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 TMEM272A0A1B0GTI8 110 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 A0A1W2PRQ8 180 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 TRBC2A0A5B9 178 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 CARNS1A5YM72 827 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 NPIPB9F8W1W9 429 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 RRP8O43159 456 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 USP17L7P0C7H9 530 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 THEGLP0DJG4 465 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 RPA2P15927 270 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 LAG3P18627 525 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 RAB5AP20339 215 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 ATP6V1E1P36543 226 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 ADCYAP1R1P41586 468 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 MAPK9P45984 424 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 ASMTP46597 345 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 MTNR1AP48039 350 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 MTNR1BP49286 362 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 LIM2P55344 173 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 WNT3P56703 355 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 PKIAP61925 76 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 MRPS10P82664 201 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 IRF8Q02556 426 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 TRA2AQ13595 282 aaKnown RBP eCLIP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 SLBPQ14493 270 aaKnown RBP eCLIP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 ZNF239Q16600 458 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 ACTBL2Q562R1 376 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 FBXO47Q5MNV8 452 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 GFI1BQ5VTD9 330 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 ARHGAP11AQ6P4F7 1023 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 TSSK4Q6SA08 328 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 CLEC2AQ6UVW9 174 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 NKAPQ8N5F7 415 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 STOML3Q8TAV4 291 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 IP6K3Q96PC2 410 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 INSM2Q96T92 566 aaPredicted RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 TAS2R5Q9NYW4 299 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 PCDHB11Q9Y5F2 797 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 DSPPQ9NZW4 1301 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 TRAV14DV4A0A0A6YYC5 116 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 UBE2QL1A1L167 161 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 GLTPD2A6NH11 291 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 F5H0A9 414 aaPredicted RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 TOX3O15405 576 aaPredicted RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 MOSPD3O75425 235 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 PCDH8O95206 1070 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 SFTA3P0C7M3 94 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 GKN3PP0CG01 181 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 PAX6P26367 422 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 LIMS1P48059 325 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 CAP1Q01518 475 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 NHLH2Q02577 135 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 KIAA0141Q14154 515 aaPredicted RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 MEF2DQ14814 521 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 JMJD6Q6NYC1 403 aaPredicted RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 ARL9Q6T311 187 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 RBM45Q8IUH3 476 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 OR6V1Q8N148 313 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 MUC20Q8N307 709 aaPredicted RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 GTPBP8Q8N3Z3 284 aaPredicted RBP11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 NRIP2Q9BQI9 281 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 EGLN1Q9GZT9 426 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 RDH14Q9HBH5 336 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 DUSP22Q9NRW4 184 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 GKN1Q9NS71 199 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 GOLT1BQ9Y3E0 138 aa11.67□□□□□ -0.54
SLC28A1-203ENST00000394573 A6NNC1 897 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 ZNF726A6NNF4 738 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 TMEM189-UBE2V1I3L0A0 370 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 PHOX2AO14813 284 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 TAPBPO15533 448 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 FFAR2O15552 330 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 MT-ND4LP03901 98 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 CERS1P27544 350 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 CD96P40200 585 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 MAP3K8P41279 467 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 HGFACQ04756 655 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 DYRK1AQ13627 763 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 CSRP2Q16527 193 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 CLEC12AQ5QGZ9 265 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 SYT12Q8IV01 421 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 OR2AK2Q8NG84 335 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 OR13C5Q8NGS8 318 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 OR6X1Q8NH79 312 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 OR5AK3PQ8NH89 298 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 BBS10Q8TAM1 723 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 CD200R1Q8TD46 325 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 OCSTAMPQ9BR26 566 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 POPDC3Q9HBV1 291 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 TLR8Q9NR97 1041 aaKnown RBP11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 WWOXQ9NZC7 414 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 SLC27A6Q9Y2P4 619 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 CKAP5Q14008 2032 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 G3V3G9 751 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 CACNG1Q06432 222 aa11.66□□□□□ -0.54
SLC28A1-203ENST00000394573 GRB14Q14449 540 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms