RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 MYL12AP19105 171 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 SLC37A1P57057 533 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 MXD1Q05195 221 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 CRYZQ08257 329 aaKnown RBP13.87□□□□□ -0.19
GPC3-202ENST00000394299 GXYLT1Q4G148 440 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 C3orf38Q5JPI3 329 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 APOOLQ6UXV4 268 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 DCDC5Q6ZRR9 648 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 TMPRSS11FQ6ZWK6 438 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 CXXC5Q7LFL8 322 aaKnown RBP13.87□□□□□ -0.19
GPC3-202ENST00000394299 PLXDC1Q8IUK5 500 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 SIRT6Q8N6T7 355 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 CYB561A3Q8NBI2 242 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 BRIX1Q8TDN6 353 aaKnown RBP13.87□□□□□ -0.19
GPC3-202ENST00000394299 PTP4A1Q93096 173 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 TBX5Q99593 518 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 TOR4AQ9NXH8 423 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 CTDSP2O14595 271 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 CHP2O43745 196 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 PTP4A3O75365 173 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 SULT1C4O75897 302 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 BMP7P18075 431 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 NOS3P29474 1203 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 ATP6V1E1P36543 226 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 MLLT11Q13015 90 aaPredicted RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 FHL1Q13642 323 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 CD226Q15762 336 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 ZNF791Q3KP31 576 aaPredicted RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 KLHL12Q53G59 568 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 ZNF362Q5T0B9 420 aaPredicted RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 RNLSQ5VYX0 342 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 FAAH2Q6GMR7 532 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 BMP8AQ7Z5Y6 402 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 GRAMD2AQ8IUY3 354 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 CDK20Q8IZL9 346 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 KBTBD8Q8NFY9 601 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 OR51G2Q8NGK0 314 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 SNRNP27Q8WVK2 155 aaKnown RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 CCDC74AQ96AQ1 378 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 ELF4Q99607 663 aaPredicted RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 TM9SF2Q99805 663 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 DPYSL5Q9BPU6 564 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 ZNF649Q9BS31 505 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 ASPNQ9BXN1 380 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 KRCC1Q9NPI7 259 aaPredicted RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 CPED1A4D0V7 1026 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 SERINC4A6NH21 518 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 PPP1R3DO95685 299 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 PSMA1P25786 263 aaKnown RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 SLC9A3P48764 834 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 WNT4P56705 351 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 RPS25P62851 125 aaKnown RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 FOXK2Q01167 660 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 C1DQ13901 141 aaKnown RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 CBLN3Q6UW01 205 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 ZNF574Q6ZN55 896 aaPredicted RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 SDR16C5Q8N3Y7 309 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 D2HGDHQ8N465 521 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 OR9Q1Q8NGQ5 310 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 ADAMTS18Q8TE60 1221 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 PMM1Q92871 262 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 GAL3ST4Q96RP7 486 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 SECISBP2Q96T21 854 aaKnown RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 G6PC3Q9BUM1 346 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 BARHL1Q9BZE3 327 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 RTN4RQ9BZR6 473 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 WDR12Q9GZL7 423 aaKnown RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 MMP27Q9H306 513 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 POLE4Q9NR33 117 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 NDUFB11Q9NX14 153 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 RHBDL2Q9NX52 303 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 CHCHD3Q9NX63 227 aaKnown RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 H2AFY2Q9P0M6 372 aaPredicted RBP13.86□□□□□ -0.19
GPC3-202ENST00000394299 GMEB2Q9UKD1 530 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 CLCA3PQ9Y6N3 262 aa13.86□□□□□ -0.19
GPC3-202ENST00000394299 CACNA1EQ15878 2313 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 PI4KAP42356 2102 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 PFDN1O60925 122 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 REM1O75628 298 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 HMGN1P05114 100 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 GYPBP06028 91 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 CLEC2LP0C7M8 214 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 SLC1A3P43003 542 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 SERTAD2Q14140 314 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 INSL4Q14641 139 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 NXNL2Q5VZ03 156 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 NIPAL1Q6NVV3 410 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 OAFQ86UD1 273 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 GPR135Q8IZ08 494 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 CLDN22Q8N7P3 220 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 OR52L1Q8NGH7 329 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 S100ZQ8WXG8 99 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 ART5Q96L15 291 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 DCLRE1CQ96SD1 692 aaKnown RBP13.85□□□□□ -0.19
GPC3-202ENST00000394299 PRRG3Q9BZD7 231 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 CHRNA10Q9GZZ6 450 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 OR51V1Q9H2C8 321 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 FGF21Q9NSA1 209 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 SNTG1Q9NSN8 517 aa13.85□□□□□ -0.19
GPC3-202ENST00000394299 WDR70Q9NW82 654 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms