RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 COX4I1P13073 169 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 PRKCAP17252 672 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 ME2P23368 584 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 PSMA4P25789 261 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 SLC6A8P48029 635 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 RPS3AP61247 264 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 RAC1P63000 192 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 FOXF1Q12946 379 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 SCARB2Q14108 478 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 SELPLGQ14242 412 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 CYP51A1Q16850 503 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 MRPL2Q5T653 305 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 RIPPLY2Q5TAB7 128 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 NANOGP8Q6NSW7 305 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 PIGWQ7Z7B1 504 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 VRK2Q86Y07 508 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 POU5F2Q8N7G0 328 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 TMEM234Q8WY98 164 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 ST8SIA1Q92185 356 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 MRGPRX4Q96LA9 322 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 NPAS1Q99742 590 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 NANOGQ9H9S0 305 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 RNF6Q9Y252 685 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 ARHGAP21Q5T5U3 1957 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 USP9YO00507 2555 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 A1L4Q6 167 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 CLCA1A8K7I4 914 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 SEC14L5O43304 696 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 BCAS1O75363 584 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 THBS1P07996 1170 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ETS2P15036 469 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 CHRNB4P30926 498 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 RYKP34925 604 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 TIMP3P35625 211 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 SUCLG1P53597 346 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 RBBP4Q09028 425 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ART3Q13508 389 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ADRM1Q16186 407 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 SLC25A53Q5H9E4 307 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ZNF311Q5JNZ3 666 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 KRT73Q86Y46 540 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ZNF440Q8IYI8 595 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 C11orf65Q8NCR3 313 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 HIPK4Q8NE63 616 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ZNF563Q8TA94 476 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 UCN2Q96RP3 112 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 SPATA5L1Q9BVQ7 753 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 SPATA9Q9BWV2 254 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 TRIM8Q9BZR9 551 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 MYLK2Q9H1R3 596 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 KAT8Q9H7Z6 458 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ACER3Q9NUN7 267 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 DNAJB12Q9NXW2 375 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ZNF443Q9Y2A4 671 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ARL2BPQ9Y2Y0 163 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 ICE1Q9Y2F5 2266 aa17.13■□□□□ 0.33
PDLIM7-204ENST00000393546 HSPB2A8KAH6 182 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 ETV2O00321 342 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 CLDN14O95500 239 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 IL2RAP01589 272 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 PABPC4LP0CB38 370 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 GP1BBP13224 206 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 ELK4P28324 431 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 CLDN15P56746 228 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 CLDN20P56880 219 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 SESN3P58005 492 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 HSPB2Q16082 182 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 RNF220Q5VTB9 566 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 ZNF836Q6ZNA1 936 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 SEM1Q6ZVN7 128 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 MAMDC2Q7Z304 686 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 ADGRE4PQ86SQ3 457 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 SERPINA11Q86U17 422 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 CCDC71Q8IV32 467 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 LILRA2Q8N149 483 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 OR8J3Q8NGG0 315 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 OR10A6Q8NH74 314 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 CA5BP1Q8WTZ4 195 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 RCN3Q96D15 328 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 CMTM5Q96DZ9 223 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 CCT8L2Q96SF2 557 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 ZNF607Q96SK3 696 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 ECSITQ9BQ95 431 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 SLC39A3Q9BRY0 314 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 EFCAB1Q9HAE3 211 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 RLIMQ9NVW2 624 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 PRDM4Q9UKN5 801 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 ANGPT4Q9Y264 503 aa17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 SPTAN1Q13813 2472 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-204ENST00000393546 A0A0G2JNJ9 132 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 CDHR4A6H8M9 788 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 MBD3L4A6NDZ8 208 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 MBD3L3A6NE82 208 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 CFAP73A6NFT4 308 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 MBD3L5A6NJ08 208 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 KDM4EB2RXH2 506 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 H0YC42 278 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 EIF1AYO14602 144 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 AIM2O14862 343 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 NTN1O95631 604 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms