RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CH25HO95992 272 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 RPN2P04844 631 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 H1F0P07305 194 aaKnown RBP7.15□□□□□ -1.26
VTI1A-201ENST00000393077 OR4Q2P0C623 313 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 RAB5AP20339 215 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ITGB7P26010 798 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ACVR2AP27037 513 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 CDKN2DP55273 166 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ACTR1AP61163 376 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 MAXP61244 160 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 MARCH8Q5T0T0 291 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PLBD1Q6P4A8 553 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ABHD13Q7L211 337 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PXKQ7Z7A4 578 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF467Q7Z7K2 595 aaPredicted RBP7.15□□□□□ -1.26
VTI1A-201ENST00000393077 MISPQ8IVT2 679 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 NUDT8Q8WV74 236 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 DEFB118Q96PH6 123 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 CLCC1Q96S66 551 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ATF6BQ99941 703 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PTPN18Q99952 460 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 SGIP1Q9BQI5 828 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 NCOR1P1Q9H4R4 102 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 NMNAT1Q9HAN9 279 aaPredicted RBP7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PDLIM7Q9NR12 457 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 C1GALT1Q9NS00 363 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 FZD10Q9ULW2 581 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 IGKV6D-21A0A0A0MT36 114 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PLSCR5A0PG75 271 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 MARCH11A6NNE9 402 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 EEF1E1-BLOC1S5C9J1V9 151 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 EDN1P05305 212 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 IL3P08700 152 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ADRB3P13945 408 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 GTF2F2P13984 249 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 BMP7P18075 431 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PPP2R1BP30154 601 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF84P51523 738 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PTTG1IPP53801 180 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 EPHA4P54764 986 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 ABRAXAS2Q15018 415 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 OR2A2Q6IF42 318 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 LPCAT3Q6P1A2 487 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 RTL10Q7L3V2 364 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PRSS45Q7RTY3 260 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 VRK3Q8IV63 474 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 IQCF1Q8N6M8 205 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 OR56B1Q8NGI3 324 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 OR8S1Q8NH09 359 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 FBLIM1Q8WUP2 373 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PHYHIPQ92561 330 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 SEC11CQ9BY50 192 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 TKTL2Q9H0I9 626 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 TLNRD1Q9H1K6 362 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 NUDT4Q9NZJ9 180 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 TRPC4Q9UBN4 977 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 GTF2A1LQ9UNN4 478 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 PUS1Q9Y606 427 aaKnown RBP eCLIP7.15□□□□□ -1.26
VTI1A-201ENST00000393077 A0A1W2PPH5 198 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 ASPDHA6ND91 283 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 C5orf52A6NGY3 159 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 CPSF4LA6NMK7 179 aaKnown RBP7.15□□□□□ -1.27
VTI1A-201ENST00000393077 SCGNO76038 276 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 S1PR4O95977 384 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.27
VTI1A-201ENST00000393077 IQCF3P0C7M6 154 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 PIPP12273 146 aaPredicted RBP7.15□□□□□ -1.27
VTI1A-201ENST00000393077 BPIP17213 487 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 IL1RNP18510 177 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 NME2P22392 152 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 NOS3P29474 1203 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 TLX1P31314 330 aaPredicted RBP7.15□□□□□ -1.27
VTI1A-201ENST00000393077 RAP1AP62834 184 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 TTLL9Q3SXZ7 439 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF311Q5JNZ3 666 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 FAHD1Q6P587 224 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 DMRTC2Q8IXT2 367 aaPredicted RBP7.15□□□□□ -1.27
VTI1A-201ENST00000393077 SLC43A2Q8N370 569 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 ZCCHC10Q8TBK6 192 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 TMED6Q8WW62 240 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 WDR89Q96FK6 387 aaPredicted RBP7.15□□□□□ -1.27
VTI1A-201ENST00000393077 MS4A4AQ96JQ5 239 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 SYT4Q9H2B2 425 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 IKZF5Q9H5V7 419 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 KCNK12Q9HB15 430 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 CREBZFQ9NS37 354 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 PCDHB8Q9UN66 801 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 TP53TG5Q9Y2B4 290 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 PSME4Q14997 1843 aa7.15□□□□□ -1.27
VTI1A-201ENST00000393077 MAST2Q6P0Q8 1798 aa7.14□□□□□ -1.27
VTI1A-201ENST00000393077 ANKRD61A6NGH8 418 aa7.14□□□□□ -1.27
VTI1A-201ENST00000393077 SYT5O00445 386 aa7.14□□□□□ -1.27
VTI1A-201ENST00000393077 OR2F2O95006 317 aa7.14□□□□□ -1.27
VTI1A-201ENST00000393077 CSN2P05814 226 aa7.14□□□□□ -1.27
VTI1A-201ENST00000393077 PKMP14618 531 aaKnown RBP7.14□□□□□ -1.27
VTI1A-201ENST00000393077 CPEP16870 476 aa7.14□□□□□ -1.27
VTI1A-201ENST00000393077 PRPS1L1P21108 318 aa7.14□□□□□ -1.27
VTI1A-201ENST00000393077 MAPK3P27361 379 aaPredicted RBP7.14□□□□□ -1.27
VTI1A-201ENST00000393077 CD34P28906 385 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms