RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SSTR4P31391 388 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 MAP2K3P46734 347 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 CCR5P51681 352 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 ART1P52961 327 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 PGBD2Q6P3X8 592 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 MBOAT2Q6ZWT7 520 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 ARL14Q8N4G2 192 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 LSM14AQ8ND56 463 aaKnown RBP15.45■□□□□ 0.06
SCN3B-202ENST00000392770 AGBL5Q8NDL9 886 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 CCDC32Q9BV29 185 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 RBM24Q9BX46 236 aaKnown RBP15.45■□□□□ 0.06
SCN3B-202ENST00000392770 INMT-MINDY4F8WBC2 141 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 VNN2O95498 520 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 CD63P08962 238 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 PSMB10P40306 273 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 PSMA6P60900 246 aaKnown RBP15.45■□□□□ 0.06
SCN3B-202ENST00000392770 MFSD12Q6NUT3 480 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF565Q8N9K5 539 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 TRMT10AQ8TBZ6 339 aaKnown RBP15.45■□□□□ 0.06
SCN3B-202ENST00000392770 C4orf36Q96KX1 117 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 LINC00615Q96LM1 132 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-202ENST00000392770 SH2B3Q9UQQ2 575 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 OR51B4Q9Y5P0 310 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 YES1P07947 543 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF385BQ569K4 471 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 RNF113BQ8IZP6 322 aaKnown RBP15.45■□□□□ 0.06
SCN3B-202ENST00000392770 A0A1W2PQL4 384 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF701M0R085 212 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-202ENST00000392770 PLATP00750 562 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 PRKAR1BP31321 381 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 KCTD9Q7L273 389 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 GALNT6Q8NCL4 622 aa15.45■□□□□ 0.06
SCN3B-202ENST00000392770 MRPL15Q9P015 296 aaKnown RBP15.45■□□□□ 0.06
SCN3B-202ENST00000392770 FXYD6-FXYD2A0A087WZ82 144 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 A0A1B0GTL3 188 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 YKT6O15498 198 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 LCMT2O60294 686 aaKnown RBP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 RAD1O60671 282 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 IFNA21P01568 189 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 GLP1RP43220 463 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 E2F1Q01094 437 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 MALLQ13021 153 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 MED25Q71SY5 747 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 DGLUCYQ7Z3D6 616 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 SPERTQ8NA61 448 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 OR5T2Q8NGG2 359 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 FXYD6Q9H0Q3 95 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 CTNSO60931 367 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 UTS2O95399 124 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 CAPZA1P52907 286 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 DCAF12Q5T6F0 453 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 PIWIL3Q7Z3Z3 882 aaKnown RBP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 INO80EQ8NBZ0 244 aaPredicted RBP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 CCDC54Q8NEL0 328 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 INTS14Q96SY0 518 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 PRDM9Q9NQV7 894 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 FGF21Q9NSA1 209 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF701Q9NV72 531 aaPredicted RBP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 C13orf42A0A1B0GVH6 325 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 KANTRA0A1W2PQU2 76 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 LRRTM2O43300 516 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 ATE1O95260 518 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 GDF1P27539 372 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 KIAA1211LQ6NV74 962 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 OR4F15Q8NGB8 312 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 AKAP1Q92667 903 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 NUFIP1Q9UHK0 495 aaKnown RBP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF749O43361 778 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 SYT7O43581 403 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 RBM34P42696 430 aaKnown RBP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 S100A10P60903 97 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 CHRFAM7AQ494W8 412 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 GARNL3Q5VVW2 1013 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 CLEC1AQ8NC01 280 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 TMEM255BQ8WV15 326 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 CTRCQ99895 268 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 SIPA1L1O43166 1804 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 GREB1LQ9C091 1923 aaPredicted RBP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 TVP23AA6NH52 213 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 OR2AT4A6NND4 320 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 VSTM5A8MXK1 200 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 SUSD5O60279 629 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 CEACAM5P06731 702 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF26P17031 533 aaPredicted RBP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 POLR2IP36954 125 aaKnown RBP15.44■□□□□ 0.06
SCN3B-202ENST00000392770 GLO1Q04760 184 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 TRIM61Q5EBN2 209 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 IL20RBQ6UXL0 311 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 TMEM150AQ86TG1 271 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 ANKRD13BQ86YJ7 626 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 GRPEL2Q8TAA5 225 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 FOXN4Q96NZ1 517 aa15.44■□□□□ 0.06
SCN3B-202ENST00000392770 TEX13DA0A0J9YY54 714 aaPredicted RBP15.43■□□□□ 0.06
SCN3B-202ENST00000392770 KCNAB1Q14722 419 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 THOC7Q6I9Y2 204 aaKnown RBP15.43■□□□□ 0.06
SCN3B-202ENST00000392770 PHOX2BQ99453 314 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 MMACHCQ9Y4U1 282 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 APOC1P02654 83 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 CAPNS1P04632 268 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 OPRL1P41146 370 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms