RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 ZNF786Q8N393 782 aa3.59□□□□□ -1.83
SNORA40.4-201ENST00000390971 HDDC3Q8N4P3 179 aa3.59□□□□□ -1.83
SNORA40.4-201ENST00000390971 NEIL3Q8TAT5 605 aa3.59□□□□□ -1.83
SNORA40.4-201ENST00000390971 RDH5Q92781 318 aa3.59□□□□□ -1.83
SNORA40.4-201ENST00000390971 CCDC47Q96A33 483 aaKnown RBP3.59□□□□□ -1.83
SNORA40.4-201ENST00000390971 VPS35Q96QK1 796 aa3.59□□□□□ -1.83
SNORA40.4-201ENST00000390971 TESK2Q96S53 571 aa3.59□□□□□ -1.83
SNORA40.4-201ENST00000390971 B3GNT2Q9NY97 397 aa3.59□□□□□ -1.83
SNORA40.4-201ENST00000390971 PRPF19Q9UMS4 504 aaKnown RBP3.59□□□□□ -1.83
SNORA40.4-201ENST00000390971 NCAPD2Q15021 1401 aa3.59□□□□□ -1.84
SNORA40.4-201ENST00000390971 TRBV6-6A0A0A6YYG2 114 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 JAK2O60674 1132 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 NPIPB7O75200 414 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 VPS26AO75436 327 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 OPN1LWP04000 364 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 HTR1FP30939 366 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 DLSTP36957 453 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 RPS10P46783 165 aaKnown RBP3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 CCDC173Q0VFZ6 552 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 ARFRP1Q13795 201 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 TRIP10Q15642 601 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 TIGITQ495A1 244 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 NIPAL3Q6P499 406 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 PLBD1Q6P4A8 553 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 LRRC8BQ6P9F7 803 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 RNF165Q6ZSG1 346 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 FAM111AQ96PZ2 611 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 TMEM237Q96Q45 408 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 FICDQ9BVA6 458 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 DHX33Q9H6R0 707 aaKnown RBP3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 DBNDD1Q9H9R9 158 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 WSB1Q9Y6I7 421 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 TTC21BQ7Z4L5 1316 aa3.58□□□□□ -1.84
SNORA40.4-201ENST00000390971 HELTA6NFD8 242 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 STX7O15400 261 aaKnown RBP3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 TRAF3IP2O43734 574 aaPredicted RBP3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 HCN1O60741 890 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 SEC22BO75396 215 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 UGT2B17O75795 530 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 INSP01308 110 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 PAICSP22234 425 aaKnown RBP3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 IL10P22301 178 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 CALB2P22676 271 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 COX7A1P24310 79 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 PRDX3P30048 256 aaKnown RBP3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 CSNK1DP48730 415 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 MTTPP55157 894 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 EBI3Q14213 229 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 LINC01620Q4KN68 170 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 TMEM17Q86X19 198 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 LINC01561Q8N1V8 128 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 MTURNQ8N3F0 131 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 FAM71E2Q8N5Q1 922 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 UCN3Q969E3 161 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 MRPL38Q96DV4 380 aaKnown RBP3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 AKR1E2Q96JD6 320 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 RSPH9Q9H1X1 276 aaPredicted RBP3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 RHOJQ9H4E5 214 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 ZNF385DQ9H6B1 395 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 NINJ2Q9NZG7 142 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 ZNF225Q9UK10 706 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 UGT2A1Q9Y4X1 527 aa3.57□□□□□ -1.84
SNORA40.4-201ENST00000390971 A0A0U1RQV5 110 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 FAM166BA8MTA8 275 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 SNAI2O43623 268 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 DFNA5O60443 496 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 SLITRK3O94933 977 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 ARF4P18085 180 aaPredicted RBP3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 ADSSP30520 456 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 RAB40BQ12829 278 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 CEBPEQ15744 281 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 TOR1AIP1Q5JTV8 583 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 PAGE3Q5JUK9 113 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 ACSM5Q6NUN0 579 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 FAM199XQ6PEV8 388 aaPredicted RBP3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 C16orf62Q7Z3J2 963 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 GCNT2Q8N0V5 402 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 MARCH1Q8TCQ1 289 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 KCNK16Q96T55 309 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 PATZ1Q9HBE1 687 aaKnown RBP3.56□□□□□ -1.84
SNORA40.4-201ENST00000390971 ESYT2A0FGR8 921 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 A6NDX4 124 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 GJE1A6NN92 205 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 ICOSLGO75144 302 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 KLF8O95600 359 aaPredicted RBP3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 IGF1P05019 195 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 CCNCP24863 283 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 ADRA1AP35348 466 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 RABIFP47224 123 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 MAPK6Q16659 721 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 RABGAP1LQ5R372 815 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 SYT10Q6XYQ8 523 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 SYVN1Q86TM6 617 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 Q8N9W7 124 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 MDS2Q8NDY4 140 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 PAQR8Q8TEZ7 354 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 MYLPFQ96A32 169 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 GSDMCQ9BYG8 508 aa3.55□□□□□ -1.84
SNORA40.4-201ENST00000390971 NAT10Q9H0A0 1025 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms