RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 SIRPAP78324 504 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 SKP2Q13309 424 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 DAZAP2Q15038 168 aaPredicted RBP13.35□□□□□ -0.27
SNRPN-202ENST00000390687 SYPL1Q16563 259 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 GPAT3Q53EU6 434 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 SLC25A53Q5H9E4 307 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 COX20Q5RI15 118 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 HBMQ6B0K9 141 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 ZNF474Q6S9Z5 364 aaPredicted RBP13.35□□□□□ -0.27
SNRPN-202ENST00000390687 EIF3MQ7L2H7 374 aaKnown RBP13.35□□□□□ -0.27
SNRPN-202ENST00000390687 MIER2Q8N344 545 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 GOLGA6L1Q8N7Z2 621 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 ANKFN1Q8N957 763 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 PNPT1Q8TCS8 783 aaKnown RBP13.35□□□□□ -0.27
SNRPN-202ENST00000390687 MRGPRX4Q96LA9 322 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 KLHL15Q96M94 604 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 THUMPD3Q9BV44 507 aaKnown RBP13.35□□□□□ -0.27
SNRPN-202ENST00000390687 PRRG4Q9BZD6 226 aa13.35□□□□□ -0.27
SNRPN-202ENST00000390687 PAQR5Q9NXK6 330 aaPredicted RBP13.35□□□□□ -0.27
SNRPN-202ENST00000390687 ETV2O00321 342 aaPredicted RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 CYP7B1O75881 506 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 H6PDO95479 791 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 UBTFL6P0CB48 400 aaPredicted RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 SFTPDP35247 375 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 PGM1P36871 562 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 FAM27E3Q08E93 113 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 CBFBQ13951 182 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 FGFBP1Q14512 234 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 QPRTQ15274 297 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 PPP4R4Q6NUP7 873 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 FAM214BQ7L5A3 538 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 HMGN2P46Q86SG4 172 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 ZNF619Q8N2I2 560 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 TMCO5AQ8N6Q1 288 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 ZFP90Q8TF47 636 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 DYDC1Q8WWB3 177 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 VPS33AQ96AX1 596 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 TRNT1Q96Q11 434 aaKnown RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 EBF4Q9BQW3 602 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 GPATCH1Q9BRR8 931 aaKnown RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 QRSL1Q9H0R6 528 aaKnown RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 OPN3Q9H1Y3 402 aaPredicted RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 TCF7L2Q9NQB0 619 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 RASSF1Q9NS23 344 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 INTS9Q9NV88 658 aaKnown RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 DNAJB12Q9NXW2 375 aaKnown RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 CLEC4AQ9UMR7 237 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 LIPT1Q9Y234 373 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 CLDN24A6NM45 220 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 A6NNC1 897 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 SASH3O75995 380 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 KRT75O95678 551 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 ZCCHC18P0CG32 403 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 FCGR2AP12318 317 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 NID1P14543 1247 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 ELK4P28324 431 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 CCR4P51679 360 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 MVDP53602 400 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 TXNL4AP83876 142 aaKnown RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 TMEM176BQ3YBM2 270 aaPredicted RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 PDSS1Q5T2R2 415 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 CDH24Q86UP0 819 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 ZNF610Q8N9Z0 462 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 FAM71CQ8NEG0 241 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 ATP6V1C2Q8NEY4 427 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 OIT3Q8WWZ8 545 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 NRGNQ92686 78 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 SLC38A1Q9H2H9 487 aa13.34□□□□□ -0.27
SNRPN-202ENST00000390687 MCTS1Q9ULC4 181 aaKnown RBP13.34□□□□□ -0.27
SNRPN-202ENST00000390687 TEP1Q99973 2627 aaKnown RBP13.33□□□□□ -0.28
SNRPN-202ENST00000390687 FAM234BA2RU67 622 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 POLR3GO15318 223 aaPredicted RBP13.33□□□□□ -0.28
SNRPN-202ENST00000390687 SYNGR4O95473 234 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 CHRM4P08173 479 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 CD8BP10966 210 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 CPOXP36551 454 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 MRPL19P49406 292 aaKnown RBP13.33□□□□□ -0.28
SNRPN-202ENST00000390687 AQP5P55064 265 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 SESN3P58005 492 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 KCNJ10P78508 379 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 PLAURQ03405 335 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 MAPK11Q15759 364 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 GTDC1Q4AE62 458 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 TIGD2Q4W5G0 525 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 DNAJC14Q6Y2X3 702 aaPredicted RBP13.33□□□□□ -0.28
SNRPN-202ENST00000390687 LRRC74BQ6ZQY2 392 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 MSANTD1Q6ZTZ1 278 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 FUNDC1Q8IVP5 155 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 CKAP2Q8WWK9 683 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 ROBO4Q8WZ75 1007 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 GMPPAQ96IJ6 420 aaPredicted RBP13.33□□□□□ -0.28
SNRPN-202ENST00000390687 ITCHQ96J02 903 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 DACH2Q96NX9 599 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 POLDIP3Q9BY77 421 aaKnown RBP13.33□□□□□ -0.28
SNRPN-202ENST00000390687 SRXN1Q9BYN0 137 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 CLEC4MQ9H2X3 399 aaPredicted RBP13.33□□□□□ -0.28
SNRPN-202ENST00000390687 RMND5AQ9H871 391 aa13.33□□□□□ -0.28
SNRPN-202ENST00000390687 MTHFD2LQ9H903 347 aaPredicted RBP13.33□□□□□ -0.28
SNRPN-202ENST00000390687 PLSCR4Q9NRQ2 329 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms