RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 WNT3P56703 355 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 TEKQ02763 1124 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 RIPPLY1Q0D2K3 151 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 ENPP2Q13822 863 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 OCLNQ16625 522 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 ULK3Q6PHR2 472 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 KLHL24Q6TFL4 600 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 LIPIQ6XZB0 460 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 NLRC3Q7RTR2 1065 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 PRSS42Q7Z5A4 293 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 NRROSQ86YC3 692 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 OR9A2Q8NGT5 310 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 C5orf34Q96MH7 638 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 MVB12BQ9H7P6 319 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 A0A0B4J203 849 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 NPPBP16860 134 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 GABRA3P34903 492 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 OR10A3P58181 314 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 INSL4Q14641 139 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 ENTPD8Q5MY95 495 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 GATSQ8NAP1 163 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 OR4K14Q8NGD5 310 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 SPACA7Q96KW9 195 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 PRMT8Q9NR22 394 aaPredicted RBP13.33□□□□□ -0.28
RTF1-201ENST00000389629 CHST2Q9Y4C5 530 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 ZC3H12DA2A288 527 aaKnown RBP13.33□□□□□ -0.28
RTF1-201ENST00000389629 ANTXRLA6NF34 631 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 RFXAPO00287 272 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 HBQ1P09105 142 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 ZNF823P16415 610 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 PRSS3P35030 304 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 NEURL3Q96EH8 262 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 SEC22AQ96IW7 307 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 CNTNAP3BQ96NU0 1288 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 CMKLR1Q99788 373 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 RGCCQ9H4X1 137 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 SLC6A14Q9UN76 642 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 CCL27Q9Y4X3 112 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 CARNS1A5YM72 827 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 FZD6O60353 706 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 PPM1BO75688 479 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 C1QCP02747 245 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 TPOP07202 933 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 DCNP07585 359 aaKnown RBP13.33□□□□□ -0.28
RTF1-201ENST00000389629 LSSP48449 732 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 DEFB134Q4QY38 66 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 FAM27D1Q5T7N8 215 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 TMEM205Q6UW68 189 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 ZFP82Q8N141 532 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 ARL11Q969Q4 196 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 ZNF768Q9H5H4 540 aaKnown RBP13.33□□□□□ -0.28
RTF1-201ENST00000389629 MRPS33Q9Y291 106 aaKnown RBP13.33□□□□□ -0.28
RTF1-201ENST00000389629 SDK1Q7Z5N4 2213 aa13.33□□□□□ -0.28
RTF1-201ENST00000389629 TRAPPC13A5PLN9 417 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 CASC3O15234 703 aaKnown RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 SLCO2B1O94956 709 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 GIMD1P0DJR0 217 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 RAB3AP20336 220 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 C6orf132Q5T0Z8 1188 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 TPRA1Q86W33 373 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 RELL2Q8NC24 303 aaPredicted RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 C2CD4CQ8TF44 421 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 DPF3Q92784 378 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 C16orf58Q96GQ5 468 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 GAL3ST4Q96RP7 486 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 C1QTNF6Q9BXI9 259 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 ZNF700Q9H0M5 742 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 ABRACLQ9P1F3 81 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 NRXN2Q9P2S2 1712 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 TRBV5-3A0A0A0MS03 114 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 TMEM129A0AVI4 362 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 EIF4EP06730 217 aaKnown RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 TFPIP10646 304 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 SIM1P81133 766 aaPredicted RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 HACD4Q5VWC8 232 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 TCTN3Q6NUS6 607 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 KIAA1324Q6UXG2 1013 aaKnown RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 ZER1Q7Z7L7 766 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 SLC51BQ86UW2 128 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 FAM26EQ8N5C1 309 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 C12orf45Q8N5I9 185 aaPredicted RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 UCN3Q969E3 161 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 SOHLH2Q9NX45 425 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 MEMO1Q9Y316 297 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 EIF1AYO14602 144 aaKnown RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 POU3F3P20264 500 aaPredicted RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 SLC6A11P48066 632 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 LAIR2Q6ISS4 152 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 PRICKLE2Q7Z3G6 844 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 CCDC71Q8IV32 467 aaPredicted RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 GAL3ST3Q96A11 431 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 EIF5A2Q9GZV4 153 aaKnown RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 TMEM184CQ9NVA4 438 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 TAAR2Q9P1P5 351 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 MRTO4Q9UKD2 239 aaKnown RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 ARID2Q68CP9 1835 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 TRBV5-4A0A0C4DH59 114 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 EDDM13A0A1B0GTR0 161 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 FADS1O60427 444 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 TPPPO94811 219 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms