RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 B3GNTL1Q67FW5 361 aaPredicted RBP24.51■■□□□ 1.51
MSX1-201ENST00000382723 OR5M10Q6IEU7 315 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 KLHL17Q6TDP4 642 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 OPN5Q6U736 354 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 TOR1AIP2Q8NFQ8 470 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 THOC3Q96J01 351 aaKnown RBP24.51■■□□□ 1.51
MSX1-201ENST00000382723 METTL7AQ9H8H3 244 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 SELENONQ9NZV5 590 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 LOC100130705A0A1B0GUX0 176 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 CHP2O43745 196 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 EIF4E2O60573 245 aaKnown RBP24.51■■□□□ 1.51
MSX1-201ENST00000382723 NUDT14O95848 222 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 ENDOUP21128 410 aaKnown RBP24.51■■□□□ 1.51
MSX1-201ENST00000382723 NPRL3Q12980 569 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 ATP1A1-AS1Q5TC04 95 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 ISLR2Q6UXK2 745 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 MBOAT2Q6ZWT7 520 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 NRMQ8IXM6 262 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 ZNF563Q8TA94 476 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 PIGXQ8TBF5 258 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 MUS81Q96NY9 551 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 UCK2Q9BZX2 261 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 TRABD2BA6NFA1 517 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 ADAM10O14672 748 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 GNB5O14775 395 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 SRSF6Q13247 344 aaKnown RBP24.5■■□□□ 1.51
MSX1-201ENST00000382723 DCAF10Q5QP82 559 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 ULK3Q6PHR2 472 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 TMEM156Q8N614 296 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 TMEM239Q8WW34 195 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 FAM46AQ96IP4 442 aaKnown RBP24.5■■□□□ 1.51
MSX1-201ENST00000382723 IP6K3Q96PC2 410 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 GPA33Q99795 319 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 DGCR6LQ9BY27 220 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 GRIP2Q9C0E4 1043 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 ICAM5Q9UMF0 924 aa24.5■■□□□ 1.51
MSX1-201ENST00000382723 KPNA4O00629 521 aaPredicted RBP24.49■■□□□ 1.51
MSX1-201ENST00000382723 MYF6P23409 242 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 IFNGR2P38484 337 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 FOXC1Q12948 553 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 WBP2NLQ6ICG8 309 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 KRT80Q6KB66 452 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 GABARAPL3Q9BY60 117 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 CNIH4Q9P003 139 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 FREM2Q5SZK8 3169 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 TP53I11O14683 189 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 BCKDKO14874 412 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 SLC6A8P48029 635 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 C1orf94Q6P1W5 598 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 Q6ZPB1 254 aaPredicted RBP24.49■■□□□ 1.51
MSX1-201ENST00000382723 USP51Q70EK9 711 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 MISPQ8IVT2 679 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 ARMC10Q8N2F6 343 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 PFN4Q8NHR9 129 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 ZNF524Q96C55 264 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 KLK13Q9UKR3 277 aa24.49■■□□□ 1.51
MSX1-201ENST00000382723 TPD52P55327 224 aaPredicted RBP24.48■■□□□ 1.51
MSX1-201ENST00000382723 H3F3CQ6NXT2 135 aa24.48■■□□□ 1.51
MSX1-201ENST00000382723 OR5W2Q8NH69 310 aa24.48■■□□□ 1.51
MSX1-201ENST00000382723 B4GALNT2Q8NHY0 566 aa24.48■■□□□ 1.51
MSX1-201ENST00000382723 C3orf49Q96BT1 292 aa24.48■■□□□ 1.51
MSX1-201ENST00000382723 EIF4E1BA6NMX2 242 aaKnown RBP24.47■■□□□ 1.51
MSX1-201ENST00000382723 SLC16A6O15403 523 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 SOX14O95416 240 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 OMPP47874 163 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 GSSP48637 474 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 P2RX1P51575 399 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 GAS1P54826 345 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 ALDH6A1Q02252 535 aaKnown RBP24.47■■□□□ 1.51
MSX1-201ENST00000382723 C17orf67Q0P5P2 114 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 TOMM34Q15785 309 aaPredicted RBP24.47■■□□□ 1.51
MSX1-201ENST00000382723 COL28A1Q2UY09 1125 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 P3H2Q8IVL5 708 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 GNPDA2Q8TDQ7 276 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 RNF138Q8WVD3 245 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 DNAJA4Q8WW22 397 aaPredicted RBP24.47■■□□□ 1.51
MSX1-201ENST00000382723 ANKRD10Q9NXR5 420 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 CHCHD2Q9Y6H1 151 aaPredicted RBP24.47■■□□□ 1.51
MSX1-201ENST00000382723 POU1F1P28069 291 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 CASP3P42574 277 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 GPR4P46093 362 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 CBFBQ13951 182 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 ACER2Q5QJU3 275 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 ZNF468Q5VIY5 522 aaPredicted RBP24.47■■□□□ 1.51
MSX1-201ENST00000382723 UGT2A3Q6UWM9 527 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 PARP8Q8N3A8 854 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 PSMF1Q92530 271 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 NXPE2Q96DL1 559 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 NR1H4Q96RI1 486 aaPredicted RBP24.47■■□□□ 1.51
MSX1-201ENST00000382723 ATP13A2Q9NQ11 1180 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 HPF1Q9NWY4 346 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 REV1Q9UBZ9 1251 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 GMPPBQ9Y5P6 360 aa24.47■■□□□ 1.51
MSX1-201ENST00000382723 IGFBP1P08833 259 aaPredicted RBP24.46■■□□□ 1.51
MSX1-201ENST00000382723 PGCP20142 388 aa24.46■■□□□ 1.51
MSX1-201ENST00000382723 SPINK2P20155 84 aa24.46■■□□□ 1.51
MSX1-201ENST00000382723 ITGA3P26006 1051 aa24.46■■□□□ 1.51
MSX1-201ENST00000382723 MST1P26927 711 aa24.46■■□□□ 1.51
MSX1-201ENST00000382723 PTGDSP41222 190 aa24.46■■□□□ 1.51
MSX1-201ENST00000382723 RPP38P78345 283 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms