RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 OR8J2Q8NGG1 315 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 FBXO27Q8NI29 283 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 GPR119Q8TDV5 335 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 ZFP90Q8TF47 636 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 TMEM234Q8WY98 164 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 ST8SIA1Q92185 356 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 OTUB1Q96FW1 271 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-202ENST00000381208 OR7D2Q96RA2 312 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 SDF2Q99470 211 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 PRR14Q9BWN1 585 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 PARD6BQ9BYG5 372 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 GSX2Q9BZM3 304 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 ACTR6Q9GZN1 396 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 CXorf56Q9H5V9 222 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 SSU72Q9NP77 194 aaKnown RBP11.59□□□□□ -0.55
RPAIN-202ENST00000381208 POLE3Q9NRF9 147 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 KLHL9Q9P2J3 617 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 KLHL13Q9P2N7 655 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 GIMAP2Q9UG22 337 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 CARD8Q9Y2G2 431 aa11.59□□□□□ -0.55
RPAIN-202ENST00000381208 NUP214P35658 2090 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-202ENST00000381208 VPS13CQ709C8 3753 aa11.58□□□□□ -0.55
RPAIN-202ENST00000381208 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-202ENST00000381208 SERINC4A6NH21 518 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 TM9SF1O15321 606 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 RGS16O15492 202 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-202ENST00000381208 KLF4O43474 513 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 OPN1LWP04000 364 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 YES1P07947 543 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 MATN1P21941 496 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 FKBP2P26885 142 aaKnown RBP11.58□□□□□ -0.56
RPAIN-202ENST00000381208 LOXP28300 417 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-202ENST00000381208 ARRB2P32121 409 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 P2RY6Q15077 328 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 ZNF141Q15928 474 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 PGS1Q32NB8 556 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 TMEM176BQ3YBM2 270 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-202ENST00000381208 ATAD3BQ5T9A4 648 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 ANKRD34AQ69YU3 496 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 C3orf33Q6P1S2 294 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 CBLN3Q6UW01 205 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 FCRLAQ7L513 359 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 C6orf120Q7Z4R8 191 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 CROCCP2Q86T23 111 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 KRTAP1-3Q8IUG1 177 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 NPAS1Q99742 590 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 LAT2Q9GZY6 243 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 GSX1Q9H4S2 264 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-202ENST00000381208 ZNF395Q9H8N7 513 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-202ENST00000381208 SERINC1Q9NRX5 453 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 RAP2CQ9Y3L5 183 aa11.58□□□□□ -0.56
RPAIN-202ENST00000381208 RNF103-CHMP3A0A140T963 221 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 PRSS51A0A1B0GVH4 220 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 ATP8B1O43520 1251 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 DNAJA2O60884 412 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 ERLIN1O75477 346 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 NTN1O95631 604 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 THBDP07204 575 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 NID1P14543 1247 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 PAX1P15863 534 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 HOXB4P17483 251 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-202ENST00000381208 IL32P24001 234 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 CLNS1AP54105 237 aaKnown RBP11.57□□□□□ -0.56
RPAIN-202ENST00000381208 ABCE1P61221 599 aaKnown RBP11.57□□□□□ -0.56
RPAIN-202ENST00000381208 TXNL4AP83876 142 aaKnown RBP11.57□□□□□ -0.56
RPAIN-202ENST00000381208 ARHGAP11BQ3KRB8 267 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 KRT71Q3SY84 523 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.57□□□□□ -0.56
RPAIN-202ENST00000381208 CLEC9AQ6UXN8 241 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 TFAP2EQ6VUC0 442 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 ZNF704Q6ZNC4 412 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-202ENST00000381208 EIF3MQ7L2H7 374 aaKnown RBP11.57□□□□□ -0.56
RPAIN-202ENST00000381208 TMCO5AQ8N6Q1 288 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 ZNF611Q8N823 705 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 MIPOL1Q8TD10 442 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 ABHD3Q8WU67 409 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 SLC25A43Q8WUT9 341 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-202ENST00000381208 TMEM171Q8WVE6 324 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 ROBO4Q8WZ75 1007 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 HSD17B8Q92506 261 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 TESCQ96BS2 214 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 SLC35G5Q96KT7 338 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 DPY30Q9C005 99 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 ZNF350Q9GZX5 532 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 SLC35A3Q9Y2D2 325 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 SPIN1Q9Y657 262 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-202ENST00000381208 DSCAMO60469 2012 aa11.57□□□□□ -0.56
RPAIN-202ENST00000381208 NPIPA5A0A0B4J1W7 369 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 NPIPA7E9PJI5 369 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 CNOT4O95628 575 aaKnown RBP11.56□□□□□ -0.56
RPAIN-202ENST00000381208 FESP07332 822 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 NPIPA8P0DM63 369 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 PGCP20142 388 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 UQCRC2P22695 453 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 RPL14P50914 215 aaKnown RBP11.56□□□□□ -0.56
RPAIN-202ENST00000381208 CCR4P51679 360 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 CSNK2A1P68400 391 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-202ENST00000381208 LTBQ06643 244 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 QPRTQ15274 297 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 CHI3L2Q15782 390 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms