RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PIGXQ8TBF5 258 aa12.89□□□□□ -0.35
SDC1-202ENST00000381150 ARRDC3Q96B67 414 aa12.89□□□□□ -0.35
SDC1-202ENST00000381150 WDR34Q96EX3 536 aa12.89□□□□□ -0.35
SDC1-202ENST00000381150 C4orf36Q96KX1 117 aa12.89□□□□□ -0.35
SDC1-202ENST00000381150 TAS2R3Q9NYW6 316 aa12.89□□□□□ -0.35
SDC1-202ENST00000381150 MRTO4Q9UKD2 239 aaKnown RBP12.89□□□□□ -0.35
SDC1-202ENST00000381150 OR10H1Q9Y4A9 318 aa12.89□□□□□ -0.35
SDC1-202ENST00000381150 ASB4Q9Y574 426 aa12.89□□□□□ -0.35
SDC1-202ENST00000381150 ADH5P11766 374 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 IFNGR2P38484 337 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 MAGEB1P43366 347 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 OR12D2P58182 307 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 ELOAQ14241 798 aaKnown RBP12.88□□□□□ -0.35
SDC1-202ENST00000381150 EOGTQ5NDL2 527 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 TMEM240Q5SV17 173 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 SLC6A19Q695T7 634 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 LRRN1Q6UXK5 716 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 SDR16C5Q8N3Y7 309 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 FGF20Q9NP95 211 aaPredicted RBP12.88□□□□□ -0.35
SDC1-202ENST00000381150 ANKRD61A6NGH8 418 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 B4GALT2O60909 372 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 SULT1A3P0DMM9 295 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 SULT1A4P0DMN0 295 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 CLUP10909 449 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 GDI2P50395 445 aaKnown RBP12.88□□□□□ -0.35
SDC1-202ENST00000381150 IGSF11Q5DX21 431 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 FGD2Q7Z6J4 655 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 HDDC3Q8N4P3 179 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 LRRC46Q96FV0 321 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 ZCCHC2Q9C0B9 1178 aaKnown RBP12.88□□□□□ -0.35
SDC1-202ENST00000381150 CCDC86Q9H6F5 360 aaKnown RBP12.88□□□□□ -0.35
SDC1-202ENST00000381150 DENND4AQ7Z401 1863 aa12.88□□□□□ -0.35
SDC1-202ENST00000381150 MEIS3P1A6NDR6 274 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 H7BY64 318 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 KPNA3O00505 521 aaPredicted RBP12.87□□□□□ -0.35
SDC1-202ENST00000381150 DRD2P14416 443 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 F8A1P23610 371 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 TP53I3Q53FA7 332 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 OR8K3Q8NH51 312 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 C2CD4CQ8TF44 421 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 TNFAIP8L1Q8WVP5 186 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 WNT2BQ93097 391 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 PRAP1Q96NZ9 151 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 DERL3Q96Q80 235 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 SGPP1Q9BX95 441 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 SEMA4GQ9NTN9 838 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 TAC3Q9UHF0 121 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 GPR55Q9Y2T6 319 aaPredicted RBP12.87□□□□□ -0.35
SDC1-202ENST00000381150 A0A1W2PRQ8 180 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 ARRDC5A6NEK1 342 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 BET1O15155 118 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 ADRB1P08588 477 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 NMBP08949 121 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 GSTM3P21266 225 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 VIPR2P41587 438 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 CCR8P51685 355 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 STX4Q12846 297 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 TMEM255AQ5JRV8 349 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 CACUL1Q86Y37 369 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 SFTPA1Q8IWL2 248 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 PDZD9Q8IXQ8 264 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 TBC1D19Q8N5T2 526 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 ZNF614Q8N883 585 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 OR51A7Q8NH64 312 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 C1orf216Q8TAB5 229 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 ABHD4Q8TB40 342 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 WFIKKN2Q8TEU8 576 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 TMEM255BQ8WV15 326 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 DPH1Q9BZG8 443 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 NOX3Q9HBY0 568 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 NTMQ9P121 344 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 CYB5R1Q9UHQ9 305 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 GMEB2Q9UKD1 530 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 PRAMEF27A3QJZ7 478 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 ANTXRLA6NF34 631 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 H7C2Y5 167 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 STARP49675 285 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 ZNF169Q14929 603 aaPredicted RBP12.87□□□□□ -0.35
SDC1-202ENST00000381150 ETFDHQ16134 617 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 NDUFA9Q16795 377 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 SHEQ5VZ18 495 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 ZFP82Q8N141 532 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 TMIEQ8NEW7 156 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 GOT1L1Q8NHS2 421 aaPredicted RBP12.87□□□□□ -0.35
SDC1-202ENST00000381150 LGALS14Q8TCE9 139 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 GHSRQ92847 366 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 NDC1Q9BTX1 674 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 EFCAB11Q9BUY7 163 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 OR2AG1Q9H205 316 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 MAN2C1Q9NTJ4 1040 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 PCYT1BQ9Y5K3 369 aaPredicted RBP12.87□□□□□ -0.35
SDC1-202ENST00000381150 KCNE3Q9Y6H6 103 aa12.87□□□□□ -0.35
SDC1-202ENST00000381150 KRBOX1C9JBD0 128 aa12.86□□□□□ -0.35
SDC1-202ENST00000381150 GLAP06280 429 aa12.86□□□□□ -0.35
SDC1-202ENST00000381150 SAGP10523 405 aaPredicted RBP12.86□□□□□ -0.35
SDC1-202ENST00000381150 ATF1P18846 271 aa12.86□□□□□ -0.35
SDC1-202ENST00000381150 GAS1P54826 345 aa12.86□□□□□ -0.35
SDC1-202ENST00000381150 BTN2A1Q7KYR7 527 aa12.86□□□□□ -0.35
SDC1-202ENST00000381150 BADQ92934 168 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms