RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SSTR4P31391 388 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ETV5P41161 510 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ETV6P41212 452 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ARL4DP49703 201 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ETV1P50549 477 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 AFF3P51826 1226 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 GPLD1P80108 840 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 MAT1AQ00266 395 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ACSM1Q08AH1 577 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 TPBGQ13641 420 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CXXC5Q7LFL8 322 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 LAPTM4BQ86VI4 370 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 MEX3DQ86XN8 651 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 KMT5CQ86Y97 462 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 PLXDC1Q8IUK5 500 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 PHC2Q8IXK0 858 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 LNX2Q8N448 690 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 OR52N1Q8NH53 320 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CNOT9Q92600 299 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 BPIFA2Q96DR5 249 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 SAMD8Q96LT4 415 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 LRFN5Q96NI6 719 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 COQ7Q99807 217 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF426Q9BUY5 554 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 MROQ9BYG7 248 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 DPH1Q9BZG8 443 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 DUSP15Q9H1R2 295 aaPredicted RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 EXOSC4Q9NPD3 245 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 RXFP3Q9NSD7 469 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CUTCQ9NTM9 273 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 GALNT8Q9NY28 637 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 SEMA5BQ9P283 1151 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 LRIT1Q9P2V4 623 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 RPS6KB2Q9UBS0 482 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CBLCQ9ULV8 474 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ERVK-19Q9WJR5 959 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 SLC35A3Q9Y2D2 325 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 GPR52Q9Y2T5 361 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 RNF215Q9Y6U7 377 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 NUP210LQ5VU65 1888 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 MN1Q10571 1320 aaPredicted RBP9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 hCG_2014768A0A024R1R8 64 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 IGHV1OR21-1A0A087WYE8 117 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 A0A1B0GWA3 101 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 C1QTNF9BB2RNN3 333 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 BHLHE40O14503 412 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 BCAT2O15382 392 aaPredicted RBP9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 IFNA16P05015 189 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 MSL3P1P0C860 447 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 C1QTNF9P0C862 333 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 MAKP20794 623 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 LCN1P31025 176 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 SOX3P41225 446 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 ACAA2P42765 397 aaKnown RBP9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 SLC1A3P43003 542 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 CRYBB2P43320 205 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 CAPZA2P47755 286 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 GPR143P51810 404 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 BTG2P78543 158 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 HSD11B2P80365 405 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 BDH1Q02338 343 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 PLAURQ03405 335 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF181Q2M3W8 571 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 TRIM16LQ309B1 348 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 PLK5Q496M5 336 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 ULK3Q6PHR2 472 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 SMARCD3Q6STE5 483 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 NPSR1Q6W5P4 371 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 WDR88Q6ZMY6 472 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 QSOX2Q6ZRP7 698 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 PRSS42Q7Z5A4 293 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 ZAR1Q86SH2 424 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 SLITRK4Q8IW52 837 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 SHISA5Q8N114 240 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 KLHL36Q8N4N3 616 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF614Q8N883 585 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF615Q8N8J6 731 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 GALNT6Q8NCL4 622 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 RCBTB1Q8NDN9 531 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 PFN4Q8NHR9 129 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 C16orf52Q8NHV5 167 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 RNF217Q8TC41 542 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 UFD1Q92890 307 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 ABTB1Q969K4 478 aaPredicted RBP9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 ARHGAP9Q9BRR9 750 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 CNPPD1Q9BV87 410 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 ASPNQ9BXN1 380 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 C6orf62Q9GZU0 229 aaPredicted RBP9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 SPRTNQ9H040 489 aaPredicted RBP9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 NUAK2Q9H093 628 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 CAPN10Q9HC96 672 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 CMC2Q9NRP2 79 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 INPP5EQ9NRR6 644 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 MRTO4Q9UKD2 239 aaKnown RBP9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 OR10H1Q9Y4A9 318 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 UGT2A1Q9Y4X1 527 aa9.66□□□□□ -0.86
POLR2J3-201ENST00000379340 COL5A1P20908 1838 aaPredicted RBP9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 SPEGQ15772 3267 aa9.65□□□□□ -0.86
POLR2J3-201ENST00000379340 SERINC4A6NH21 518 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms