RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ENPP5Q9UJA9 477 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 RNF215Q9Y6U7 377 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 NINQ8N4C6 2090 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 YKT6O15498 198 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 CTSVO60911 334 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 CHRM4P08173 479 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 S1PR1P21453 382 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 SLC5A2P31639 672 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 BTG2P78543 158 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 PITPNAQ00169 270 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 CBFBQ13951 182 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 LRFN4Q6PJG9 635 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 EVA1AQ9H8M9 152 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 RPRD1BQ9NQG5 326 aaKnown RBP13.48□□□□□ -0.25
TCOF1-202ENST00000377797 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-202ENST00000377797 HSD17B12Q53GQ0 312 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 MBOAT2Q6ZWT7 520 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 GDF7Q7Z4P5 450 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 PEG10Q86TG7 708 aaKnown RBP13.48□□□□□ -0.25
TCOF1-202ENST00000377797 MEIOBQ8N635 442 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 TMEM255BQ8WV15 326 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 NXPE2Q96DL1 559 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 MSLNLQ96KJ4 702 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 RPH3AQ9Y2J0 694 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-202ENST00000377797 CCL27Q9Y4X3 112 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 HOXC4P09017 264 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-202ENST00000377797 MYF5P13349 255 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 FCARP24071 287 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 MMP11P24347 488 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 NUP62P37198 522 aaPredicted RBP13.48□□□□□ -0.25
TCOF1-202ENST00000377797 RASGEF1BQ0VAM2 473 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 SGCAQ16586 387 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 NKG7Q16617 165 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 TCTN3Q6NUS6 607 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 RASSF6Q6ZTQ3 369 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 SLC22A16Q86VW1 577 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 CA13Q8N1Q1 262 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 STACQ99469 402 aa13.48□□□□□ -0.25
TCOF1-202ENST00000377797 IGHV1OR15-9A0A0B4J2B8 117 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 SOD1P00441 154 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 CSF2P04141 144 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 NID1P14543 1247 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 RAB15P59190 212 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 ZNF45Q02386 682 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 NKAIN1Q4KMZ8 207 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 LIN54Q6MZP7 749 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 Q7L0L9 218 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 SLITRK4Q8IW52 837 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 MS4A15Q8N5U1 240 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 SAMD12Q8N8I0 201 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 MAFAQ8NHW3 353 aaPredicted RBP13.47□□□□□ -0.25
TCOF1-202ENST00000377797 DUSP19Q8WTR2 217 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 B3GNT4Q9C0J1 378 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 RNF121Q9H920 327 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 ING3Q9NXR8 418 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 SERTM1A2A2V5 107 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 SIGLEC6O43699 453 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 PSKH1P11801 424 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 GLB1P16278 677 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 RBMS1P29558 406 aaKnown RBP13.47□□□□□ -0.25
TCOF1-202ENST00000377797 ISL1P61371 349 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 VWA2Q5GFL6 755 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 PGBD2Q6P3X8 592 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 SNX29P2Q8IUI4 249 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 RHOXF1Q8NHV9 184 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 H2BFMP0C1H6 154 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 TRAM1Q15629 374 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 ABHD17BQ5VST6 288 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 TMEM179BQ7Z7N9 219 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 OR4F15Q8NGB8 312 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 GPBAR1Q8TDU6 330 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 DDIT4LQ96D03 193 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 NSG1A0A0A6YYJ2 146 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 DLGAP1O14490 977 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 RGS6P49758 472 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 DNASE1L3Q13609 305 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 ZNF836Q6ZNA1 936 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 ZER1Q7Z7L7 766 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 CADM4Q8NFZ8 388 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 CEP76Q8TAP6 659 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 NDNFQ8TB73 568 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 BCL7BQ9BQE9 202 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 B3GAT2Q9NPZ5 323 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 ASB4Q9Y574 426 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 UNC13CQ8NB66 2214 aa13.47□□□□□ -0.25
TCOF1-202ENST00000377797 HOXC12P31275 282 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 B3GLCTQ6Y288 498 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 P4HA3Q7Z4N8 544 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 NKAIN4Q8IVV8 208 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 TNFRSF13CQ96RJ3 184 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 SLC22A4Q9H015 551 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 ZNF337Q9Y3M9 751 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 A0A087WUU8 490 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 ATE1O95260 518 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 OPN1LWP04000 364 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 CELA2BP08218 269 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-202ENST00000377797 SMURF1Q9HCE7 757 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 BCL2L10Q9HD36 194 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 B4GALT7Q9UBV7 327 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 PSORS1C1Q9UIG5 152 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms