RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 LRRTM4Q86VH4 590 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 LNX2Q8N448 690 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 SRFBP1Q8NEF9 429 aaKnown RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 ADAMTS15Q8TE58 950 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 TEAD3Q99594 435 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 PRSS27Q9BQR3 290 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 BRD7Q9NPI1 651 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 RPS6KB2Q9UBS0 482 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 TRAV1-2A0A0B4J238 106 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 FAM86C2PA6NEL3 165 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 TRIM77I1YAP6 450 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 CXCL14O95715 111 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 SBK2P0C263 348 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 NAGAP17050 411 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 ATP5A1P25705 553 aaKnown RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 OR12D2P58182 307 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 PRDX1Q06830 199 aaKnown RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 MAPK14Q16539 360 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 METRNLQ641Q3 311 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 ABHD17CQ6PCB6 329 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 CHMP1BQ7LBR1 199 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 PRSS45Q7RTY3 260 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 SLITRK4Q8IW52 837 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 UXS1Q8NBZ7 420 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 SMIM4Q8WVI0 70 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 POF1BQ8WVV4 589 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 THAP4Q8WY91 577 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 PTP4A1Q93096 173 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 COX14Q96I36 57 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 OR51V1Q9H2C8 321 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 AUNIPQ9H7T9 357 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 CMC2Q9NRP2 79 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 RDH8Q9NYR8 311 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 KLF15Q9UIH9 416 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 ZNF223Q9UK11 482 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 PPIEQ9UNP9 301 aaKnown RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 KHNYNO15037 678 aaKnown RBP19.61■□□□□ 0.73
UPF3A-202ENST00000375299 EPXP11678 715 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 MAKP20794 623 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 GDNFP39905 211 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 PRMT2P55345 433 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 RPL6Q02878 288 aaKnown RBP19.61■□□□□ 0.73
UPF3A-202ENST00000375299 ZNF77Q15935 545 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 HEPHL1Q6MZM0 1159 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 OR5J2Q8NH18 312 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 LHFPL5Q8TAF8 219 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 KAT2AQ92830 837 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 GHSRQ92847 366 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 PPA2Q9H2U2 334 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 ADGRL4Q9HBW9 690 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 NKIRAS2Q9NYR9 191 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 KIF25Q9UIL4 384 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 POMT2Q9UKY4 750 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 MKI67P46013 3256 aaKnown RBP19.61■□□□□ 0.73
UPF3A-202ENST00000375299 A0A1W2PRG6 482 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 A8MUA0 341 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 FKTNO75072 461 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 ADH1AP07327 375 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 ADRB3P13945 408 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 TEAD1P28347 426 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 TSPAN5P62079 268 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 LTB4RQ15722 352 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 MTFR2Q6P444 385 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 PFN4Q8NHR9 129 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 ZCCHC4Q9H5U6 513 aa19.61■□□□□ 0.73
UPF3A-202ENST00000375299 ANTXRLA6NF34 631 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 MOSPD3O75425 235 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 TGM6O95932 706 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 ATF4P18848 351 aaPredicted RBP19.6■□□□□ 0.73
UPF3A-202ENST00000375299 CERS1P27544 350 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 ZNF136P52737 540 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 CLDN2P57739 230 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 FOXK2Q01167 660 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 OPCMLQ14982 345 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 RAB42Q8N4Z0 105 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 FAM98AQ8NCA5 519 aaKnown RBP19.6■□□□□ 0.73
UPF3A-202ENST00000375299 C7orf57Q8NEG2 295 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 ARMC5Q96C12 935 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 WBP1Q96G27 269 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 CACYBPQ9HB71 228 aaKnown RBP19.6■□□□□ 0.73
UPF3A-202ENST00000375299 OR6C2Q9NZP2 312 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 SPATA2Q9UM82 520 aa19.6■□□□□ 0.73
UPF3A-202ENST00000375299 hCG_1807616A0A1W2PRN6 198 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 FLRT2O43155 660 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 PRAF2O60831 178 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 STX11O75558 287 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 HRGP04196 525 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 HOXD4P09016 255 aaPredicted RBP19.59■□□□□ 0.73
UPF3A-202ENST00000375299 SLC35G4P0C7Q5 338 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 CAPZA2P47755 286 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 ERVK-21P61565 698 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 CEBPEQ15744 281 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 FAM69AQ5T7M9 428 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 ERN2Q76MJ5 926 aaKnown RBP19.59■□□□□ 0.73
UPF3A-202ENST00000375299 SYT9Q86SS6 491 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 OR2A1Q8NGT9 310 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 SMPDL3BQ92485 455 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 CDS1Q92903 461 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 ZNF681Q96N22 645 aa19.59■□□□□ 0.73
UPF3A-202ENST00000375299 DDOQ99489 341 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms