RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 SKP2Q13309 424 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 QPRTQ15274 297 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 ACKR1Q16570 336 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 LSM12Q3MHD2 195 aaKnown RBP12.69□□□□□ -0.38
UBXN11-207ENST00000374223 OR4A15Q8NGL6 344 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 LILRB1Q8NHL6 650 aaPredicted RBP12.69□□□□□ -0.38
UBXN11-207ENST00000374223 RNF128Q8TEB7 428 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 IGFBPL1Q8WX77 278 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 PERPQ96FX8 193 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 SLC35G5Q96KT7 338 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 PIP5K1AQ99755 562 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 THUMPD3Q9BV44 507 aaKnown RBP12.69□□□□□ -0.38
UBXN11-207ENST00000374223 ASIC5Q9NY37 505 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 MCTS1Q9ULC4 181 aaKnown RBP12.69□□□□□ -0.38
UBXN11-207ENST00000374223 EMC9Q9Y3B6 208 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 CR1P17927 2039 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 ALPK2Q86TB3 2170 aa12.69□□□□□ -0.38
UBXN11-207ENST00000374223 RNF103-CHMP3A0A140T963 221 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 SERINC4A6NH21 518 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 ZNF814B7Z6K7 855 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 GTPBP1O00178 669 aaKnown RBP12.68□□□□□ -0.38
UBXN11-207ENST00000374223 RGS16O15492 202 aaPredicted RBP12.68□□□□□ -0.38
UBXN11-207ENST00000374223 CYP7B1O75881 506 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 LCN1P31025 176 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 SERPINB5P36952 375 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 CDKN2CP42773 168 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 PCYT1AP49585 367 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 CCR4P51679 360 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 WDR4P57081 412 aaKnown RBP12.68□□□□□ -0.38
UBXN11-207ENST00000374223 UFM1P61960 85 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 SPANXN4Q5MJ08 99 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 Q5PR19 223 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 TNFAIP8L2Q6P589 184 aaPredicted RBP12.68□□□□□ -0.38
UBXN11-207ENST00000374223 SEZ6L2Q6UXD5 910 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 MTERF4Q7Z6M4 381 aaKnown RBP12.68□□□□□ -0.38
UBXN11-207ENST00000374223 P3H2Q8IVL5 708 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 MISPQ8IVT2 679 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 TMCO5AQ8N6Q1 288 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 PLPPR2Q96GM1 343 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 COX4I2Q96KJ9 171 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 ZNF300Q96RE9 604 aaPredicted RBP12.68□□□□□ -0.38
UBXN11-207ENST00000374223 INPP5KQ9BT40 448 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 ACTR6Q9GZN1 396 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 CENPHQ9H3R5 247 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 ATAD3AQ9NVI7 634 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 ZNF226Q9NYT6 803 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 NOP53Q9NZM5 478 aaKnown RBP12.68□□□□□ -0.38
UBXN11-207ENST00000374223 PRSS50Q9UI38 385 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 RAP2CQ9Y3L5 183 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 CSPG4Q6UVK1 2322 aa12.68□□□□□ -0.38
UBXN11-207ENST00000374223 SDHDO14521 159 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 SMAD9O15198 467 aaKnown RBP12.67□□□□□ -0.38
UBXN11-207ENST00000374223 ZNF264O43296 627 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 UBL4AP11441 157 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 FCGR2AP12318 317 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 DDX5P17844 614 aaKnown RBP12.67□□□□□ -0.38
UBXN11-207ENST00000374223 NTF4P34130 210 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 RPL3P39023 403 aaKnown RBP12.67□□□□□ -0.38
UBXN11-207ENST00000374223 BST1Q10588 318 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 ZNF141Q15928 474 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 ARHGAP11BQ3KRB8 267 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 SLC25A53Q5H9E4 307 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 CEP85LQ5SZL2 805 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 TYW3Q6IPR3 259 aaKnown RBP12.67□□□□□ -0.38
UBXN11-207ENST00000374223 HEPHL1Q6MZM0 1159 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 TFAP2EQ6VUC0 442 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 GABRG1Q8N1C3 465 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 ANKRD42Q8N9B4 389 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 OR5W2Q8NH69 310 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 ZFP90Q8TF47 636 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 XAGE5Q8WWM1 108 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 ZNF75CPQ92670 426 aaPredicted RBP12.67□□□□□ -0.38
UBXN11-207ENST00000374223 PIGTQ969N2 578 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 S100PBPQ96BU1 408 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 Q96MF0 132 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 DPY30Q9C005 99 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 WDR55Q9H6Y2 383 aaPredicted RBP12.67□□□□□ -0.38
UBXN11-207ENST00000374223 SLC6A13Q9NSD5 602 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 ACTL7BQ9Y614 415 aa12.67□□□□□ -0.38
UBXN11-207ENST00000374223 GOLGA8QA0A0J9YX86 632 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 GOLGA8OA6NCC3 632 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 GOLGA8NF8WBI6 632 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 H7C1Q1 480 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 SMAD7O15105 426 aaKnown RBP12.66□□□□□ -0.38
UBXN11-207ENST00000374223 DNAJA2O60884 412 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 RAMP1O60894 148 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 SMPD2O60906 423 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 LY6G6DO95868 133 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 GSNP06396 782 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 UBTFL6P0CB48 400 aaPredicted RBP12.66□□□□□ -0.38
UBXN11-207ENST00000374223 ME2P23368 584 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 RPL14P50914 215 aaKnown RBP12.66□□□□□ -0.38
UBXN11-207ENST00000374223 NR1H2P55055 460 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 SESN3P58005 492 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 CHRNEQ04844 493 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 CASP8Q14790 479 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 TIGD2Q4W5G0 525 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 COX20Q5RI15 118 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 PRSS57Q6UWY2 283 aa12.66□□□□□ -0.38
UBXN11-207ENST00000374223 FRRS1Q6ZNA5 592 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms