RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 GCDHQ92947 438 aaPredicted RBP12.02□□□□□ -0.49
PRPF4-201ENST00000374198 PEX11GQ96HA9 241 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 TIMP4Q99727 224 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 ALG8Q9BVK2 526 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 KLHL42Q9P2K6 505 aa12.02□□□□□ -0.49
PRPF4-201ENST00000374198 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.49
PRPF4-201ENST00000374198 UBE2QL1A1L167 161 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 C5orf52A6NGY3 159 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ANHXE9PGG2 379 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 J3QRE1 110 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SURF4O15260 269 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 KHDRBS3O75525 346 aaKnown RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ATP1B1P05026 303 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 OR4Q2P0C623 313 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 LAG3P18627 525 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 CD53P19397 219 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 PSMD4P55036 377 aaKnown RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 RAB5BP61020 215 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 RPS13P62277 151 aaKnown RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 PRR5P85299 388 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 PDZK1IP1Q13113 114 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 TRAM2Q15035 370 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 TRAM1Q15629 374 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 C10orf120Q5SQS8 335 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 LINGO4Q6UY18 593 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ANKRD33Q7Z3H0 272 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 COMTD1Q86VU5 262 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 THOC6Q86W42 341 aaKnown RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 OR51G2Q8NGK0 314 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 WNT2BQ93097 391 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SCLYQ96I15 445 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 TOX2Q96NM4 488 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 QRSL1Q9H0R6 528 aaKnown RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SLC38A1Q9H2H9 487 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ZFYVE1Q9HBF4 777 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 UBE2CO00762 179 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 NDUFB6O95139 128 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 HEXAP06865 529 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 FBP1P09467 338 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SMIM10L2AP0DMW4 78 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SMIM10L2BP0DMW5 78 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 EPXP11678 715 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ATP5C1P36542 298 aaKnown RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 NSG1P42857 185 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SLC11A2P49281 568 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 PTSQ03393 145 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 HABP2Q14520 560 aaPredicted RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ARSIQ5FYB1 569 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 OLFML2AQ68BL7 652 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 FAM122BQ7Z309 247 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 VRK3Q8IV63 474 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 APCDD1Q8J025 514 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ACBD7Q8N6N7 88 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SMAP2Q8WU79 429 aaPredicted RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 RAB8BQ92930 207 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 RSPH9Q9H1X1 276 aaPredicted RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 OR51I1Q9H343 314 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 FBXO44Q9H4M3 255 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 CXorf36Q9H7Y0 433 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 PRMT8Q9NR22 394 aaPredicted RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 OR10H1Q9Y4A9 318 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ZFP37Q9Y6Q3 630 aaPredicted RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ARL5CA6NH57 179 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 E9PI62 339 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 GABARAPH6UMI1 98 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 PLPP2O43688 288 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 CTSOP43234 321 aaPredicted RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 AKR1C2P52895 323 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SORDQ00796 357 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 AKR1C1Q04828 323 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SLC3A1Q07837 685 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF805Q5CZA5 627 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 C10orf91Q5T1B1 145 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 DCAF12L2Q5VW00 463 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 CFAP206Q8IYR0 622 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 CMTM4Q8IZR5 234 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 TCEAL7Q9BRU2 100 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 SDHAF3Q9NRP4 125 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 H2AFY2Q9P0M6 372 aaPredicted RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 KLHL9Q9P2J3 617 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 DHCR7Q9UBM7 475 aaKnown RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 KLK11Q9UBX7 282 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF629Q9UEG4 869 aaPredicted RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 LHX6Q9UPM6 363 aa12.01□□□□□ -0.49
PRPF4-201ENST00000374198 CARHSP1Q9Y2V2 147 aaKnown RBP12.01□□□□□ -0.49
PRPF4-201ENST00000374198 NLRC5Q86WI3 1866 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 MBLAC1A4D2B0 266 aaPredicted RBP12□□□□□ -0.49
PRPF4-201ENST00000374198 GFYI3L273 518 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 SOCS6O14544 535 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 GOSR2O14653 212 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 GREM1O60565 184 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 STX11O75558 287 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 KRT33AO76009 404 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 PAK4O96013 591 aaPredicted RBP12□□□□□ -0.49
PRPF4-201ENST00000374198 VSIG10L2P0DP72 767 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 MAT2AP31153 395 aaKnown RBP12□□□□□ -0.49
PRPF4-201ENST00000374198 TUSC3Q13454 348 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 ACSM3Q53FZ2 586 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 UBE2NLQ5JXB2 153 aa12□□□□□ -0.49
PRPF4-201ENST00000374198 SLC6A19Q695T7 634 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms