RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 NDNFQ8TB73 568 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 JPH3Q8WXH2 748 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 NAT6Q93015 286 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC25A46Q96AG3 418 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 ZG16BQ96DA0 208 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 LCORQ96JN0 433 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 CEP19Q96LK0 163 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 SNX18Q96RF0 628 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 OR52D1Q9H346 318 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 TCEAL2Q9H3H9 227 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF768Q9H5H4 540 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF304Q9HCX3 659 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 AMBNQ9NP70 447 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 CD93Q9NPY3 652 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 CUTCQ9NTM9 273 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 DNAJB12Q9NXW2 375 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 GALNT8Q9NY28 637 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 COPS7AQ9UBW8 275 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 MOKQ9UQ07 419 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 SIGLEC7Q9Y286 467 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF337Q9Y3M9 751 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 CLCA3PQ9Y6N3 262 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 FANCMQ8IYD8 2048 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CCDC88CQ9P219 2028 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 IGHV1OR21-1A0A087WYE8 117 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 IGKV3D-11A0A0A0MRZ8 115 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 A0A1B0GX78 115 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 TCRBV16S1A1N1A0A5B0 115 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 KRBA1A5PL33 1030 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 J3QRE1 110 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 TPPPO94811 219 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 LYPD3O95274 346 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 ZIC2O95409 532 aaPredicted RBP8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CSTAP01040 98 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 MT-ND5P03915 603 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 WNT1P04628 370 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 OR2T7P0C7T2 308 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CT45A8P0DMV1 189 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CT45A9P0DMV2 189 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 SAGP10523 405 aaPredicted RBP8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 ACAA2P42765 397 aaKnown RBP8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 GRK6P43250 576 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CRYBB2P43320 205 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 GAS1P54826 345 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 RIPPLY1Q0D2K3 151 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 ITGADQ13349 1161 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 C1orf61Q13536 156 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 EFR3AQ14156 821 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 GALEQ14376 348 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 GGTLC2Q14390 218 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF267Q14586 743 aaPredicted RBP8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 MFSD13AQ14CX5 517 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CT45A2Q5DJT8 189 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 DDI2Q5TDH0 399 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 HACD4Q5VWC8 232 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 HLA-DQA1Q5Y7H0 255 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 TMEM71Q6P5X7 295 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 PLEKHG7Q6ZR37 379 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 TRILQ7L0X0 811 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF554Q86TJ5 538 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 OAFQ86UD1 273 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CCDC190Q86UF4 302 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 IGFN1Q86VF2 1251 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 COMTD1Q86VU5 262 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 MFSD4AQ8N468 514 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 GDPD1Q8N9F7 314 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 RCBTB1Q8NDN9 531 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 OR2T27Q8NH04 317 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 OR8K3Q8NH51 312 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 B4GALNT2Q8NHY0 566 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CEP76Q8TAP6 659 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 FANK1Q8TC84 345 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 PATE1Q8WXA2 126 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 SGTBQ96EQ0 304 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 PEX11GQ96HA9 241 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 HSPA12BQ96MM6 686 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CMTM3Q96MX0 182 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 ELF4Q99607 663 aaPredicted RBP8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC30A2Q9BRI3 323 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CHCHD6Q9BRQ6 235 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CDADC1Q9BWV3 514 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 ASPNQ9BXN1 380 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 LAT2Q9GZY6 243 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 IRAK4Q9NWZ3 460 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 BABAM2Q9NXR7 383 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 DNAJC27Q9NZQ0 273 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 CA14Q9ULX7 337 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 PPIEQ9UNP9 301 aaKnown RBP8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 SIT1Q9Y3P8 196 aa8.04□□□□□ -1.12
SNRNP40-202ENST00000373720 IGLV3-12A0A075B6K2 115 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 LOC100506127A0A0U1RQW1 187 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 A0A1B0GWA3 101 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 H3BMH7 237 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 PHYHO14832 338 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF264O43296 627 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 GPRIN2O60269 458 aa8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 CDC40O60508 579 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC19A2O60779 497 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms