RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 GMNCA6NCL1 334 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 TMEM233B4DJY2 109 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 H7C417 338 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 SPRY1O43609 319 aaPredicted RBP13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 SHOX2O60902 331 aaPredicted RBP13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 FGF4P08620 206 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 TTKP33981 857 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 EIF1P41567 113 aaKnown RBP13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 PKNOX1P55347 436 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 TIMM23BQ5SRD1 257 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 FAM120AOSQ5T036 256 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 CLEC6AQ6EIG7 209 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 CGB2Q6NT52 195 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 TMEM108Q6UXF1 575 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 Q6ZT83 130 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 GPRIN3Q6ZVF9 776 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 MISPQ8IVT2 679 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 MUC15Q8N387 334 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 RFLNBQ8N5W9 214 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 ACTRT2Q8TDY3 377 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 C10orf105Q8TEF2 133 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 ABHD3Q8WU67 409 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 RNF145Q96MT1 663 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 DHRS9Q9BPW9 319 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 RTN4RQ9BZR6 473 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 FARSBQ9NSD9 589 aaKnown RBP13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 C19orf53Q9UNZ5 99 aaPredicted RBP13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 FIS1Q9Y3D6 152 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 TIMM22Q9Y584 194 aa13.15□□□□□ -0.3
CDKN1A-202ENST00000373711 A0A0J9YW62 118 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 A0A1W2PRB8 838 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 TCF21O43680 179 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 RAMP1O60894 148 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 PRKD3O94806 890 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 KRT6AP02538 564 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 KRT6BP04259 564 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 YES1P07947 543 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 KITP10721 976 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 DRD4P21917 467 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 ELK4P28324 431 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 NTSP30990 170 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 KRT6CP48668 564 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 RPL14P50914 215 aaKnown RBP13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 NCBP2P52298 156 aaKnown RBP eCLIP13.14□□□□□ -0.318e-7■□□□□ 8
CDKN1A-202ENST00000373711 CBX1P83916 185 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 PLPPR5Q32ZL2 321 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 UGT3A2Q3SY77 523 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 VPS26BQ4G0F5 336 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 C11orf71Q6IPW1 123 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 KLHL17Q6TDP4 642 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 SEZ6L2Q6UXD5 910 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 C12orf54Q6X4T0 127 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 ATG4DQ86TL0 474 aaPredicted RBP13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 SLC43A2Q8N370 569 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 ARIH2OSQ8N7S6 290 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 SLC9A6Q92581 669 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 THOC1Q96FV9 657 aaKnown RBP13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 CHMP6Q96FZ7 201 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 HBEGFQ99075 208 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 LMF2Q9BU23 707 aaKnown RBP13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 RABEP2Q9H5N1 569 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 TMEM185BQ9H7F4 350 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 MED17Q9NVC6 651 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 MARCOQ9UEW3 520 aaPredicted RBP13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 TRAF6Q9Y4K3 522 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 DYSFO75923 2080 aa13.14□□□□□ -0.31
CDKN1A-202ENST00000373711 LOC100289279A0A1B0GTE1 492 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 ALG1L2C9J202 215 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 NDUFS8O00217 210 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 ZNF195O14628 629 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 AZIN1O14977 448 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 KIAA0513O60268 411 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 SNUPNO95149 360 aaKnown RBP13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 OPN1LWP04000 364 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 HPGDP15428 266 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 GGT1P19440 569 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 EFNA4P52798 201 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 SRSF2Q01130 221 aaKnown RBP13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 CHRNB3Q05901 458 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 ACSM2AQ08AH3 577 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 GRAMD1BQ3KR37 738 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 KANK2Q63ZY3 851 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 ACSM2BQ68CK6 577 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 SLC22A25Q6T423 547 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 TMEM107Q6UX40 140 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 Q6ZSR9 355 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 FCRLAQ7L513 359 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 NUFIP2Q7Z417 695 aaKnown RBP13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 MEX3DQ86XN8 651 aaKnown RBP13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 LILRA2Q8N149 483 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 ZMYND19Q96E35 227 aaPredicted RBP13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 MIEF1Q9NQG6 463 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 STK38LQ9Y2H1 464 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 FKBP7Q9Y680 259 aa13.13□□□□□ -0.31
CDKN1A-202ENST00000373711 PMF1-BGLAPU3KQ54 211 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms