RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 DECR1Q16698 335 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 TMEM255AQ5JRV8 349 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 TCTE1Q5JU00 501 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 SHEQ5VZ18 495 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 MBOAT2Q6ZWT7 520 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 BTN2A1Q7KYR7 527 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 GPAT4Q86UL3 456 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 DCUN1D3Q8IWE4 304 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 NUP43Q8NFH3 380 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 OR5J2Q8NH18 312 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 C20orf85Q9H1P6 137 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 C20orf141Q9NUB4 165 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 MED17Q9NVC6 651 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 KLHL28Q9NXS3 571 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 PTTG3PQ9NZH4 202 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 AK6Q9Y3D8 172 aaKnown RBP12.72□□□□□ -0.37
USP49-201ENST00000373006 WNT6Q9Y6F9 365 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 LRIT2A6NDA9 550 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 SPINT1O43278 529 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 ERI3O43414 337 aaKnown RBP12.72□□□□□ -0.37
USP49-201ENST00000373006 UBL3O95164 117 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 MT-ND5P03915 603 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 VEGFCP49767 419 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 FXYD6P3P58550 94 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 SLC9A5Q14940 896 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 MLC1Q15049 377 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 PRPF38BQ5VTL8 546 aaKnown RBP12.72□□□□□ -0.37
USP49-201ENST00000373006 ALKAL2Q6UX46 152 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 PFN4Q8NHR9 129 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 COL26A1Q96A83 441 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 SFXN2Q96NB2 322 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 ERMAPQ96PL5 475 aaPredicted RBP12.72□□□□□ -0.37
USP49-201ENST00000373006 SPHK2Q9NRA0 654 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 HCFC2Q9Y5Z7 792 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 COL4A3Q01955 1670 aa12.72□□□□□ -0.37
USP49-201ENST00000373006 KIF26AQ9ULI4 1882 aaPredicted RBP12.71□□□□□ -0.37
USP49-201ENST00000373006 ANTXRLA6NF34 631 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 LRRN3E7EW58 273 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 KLF4O43474 513 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 C6P13671 934 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 MMP15P51511 669 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 TPMTP51580 245 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 GPR85P60893 370 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 BDH1Q02338 343 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 ADGRG3Q86Y34 549 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 RFLNBQ8N5W9 214 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 UXS1Q8NBZ7 420 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 OR2T4Q8NH00 348 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 OR56B4Q8NH76 319 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 TEAD3Q99594 435 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 LRRN3Q9H3W5 708 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 RCE1Q9Y256 329 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 STON1Q9Y6Q2 735 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 MYO9BQ13459 2157 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 HEATR5BQ9P2D3 2071 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 CENPVL1A0A0U1RR11 272 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 CDHR4A6H8M9 788 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 PLPP2O43688 288 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 C8AP07357 584 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 GKN3PP0CG01 181 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 GDNFP39905 211 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 CSNK1G2P78368 415 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 SIM1P81133 766 aaPredicted RBP12.71□□□□□ -0.37
USP49-201ENST00000373006 REEP5Q00765 189 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 NOGQ13253 232 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 OPCMLQ14982 345 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 SSX6Q7RTT6 188 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 AMZ2Q86W34 360 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 SERPINA12Q8IW75 414 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 LINC01555Q8NAE3 123 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 SLC16A11Q8NCK7 471 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 ZNF671Q8TAW3 534 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 GANCQ8TET4 914 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 LIN7BQ9HAP6 207 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 COPZ2Q9P299 210 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 GMEB2Q9UKD1 530 aa12.71□□□□□ -0.37
USP49-201ENST00000373006 A0A1W2PPV9 198 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 TSPAN11A1L157 253 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 LATO43561 262 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 TFP02787 698 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 PRG2P13727 222 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 MAKP20794 623 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 TM4SF4P48230 202 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 ANXA11P50995 505 aaKnown RBP12.71□□□□□ -0.38
USP49-201ENST00000373006 SHC2P98077 582 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 FAAP20Q6NZ36 180 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 THSD4Q6ZMP0 1018 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 LINGO2Q7L985 606 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 TPRA1Q86W33 373 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 GID4Q8IVV7 300 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 NRSN1Q8IZ57 195 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 LINC00518Q8N0U6 118 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 OR11G2Q8NGC1 345 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 KISS1RQ969F8 398 aaPredicted RBP12.71□□□□□ -0.38
USP49-201ENST00000373006 CXorf58Q96LI9 332 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 KLHL15Q96M94 604 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 C12orf57Q99622 126 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 PELI2Q9HAT8 420 aa12.71□□□□□ -0.38
USP49-201ENST00000373006 RPS6KB2Q9UBS0 482 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms