RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 OXA1LQ15070 435 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 PLK5Q496M5 336 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 ALG10BQ5I7T1 473 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 PERM1Q5SV97 790 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 ULK3Q6PHR2 472 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 SNX29P2Q8IUI4 249 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 SLC25A45Q8N413 288 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 OR7G1Q8NGA0 311 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 OR13C2Q8NGS9 318 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 TM9SF4Q92544 642 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 OTULINQ96BN8 352 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 MVB12AQ96EY5 273 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 TRMT61AQ96FX7 289 aaKnown RBP12.34□□□□□ -0.43
CSTF2-201ENST00000372972 ARHGAP9Q9BRR9 750 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 ZNF426Q9BUY5 554 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 YIPF2Q9BWQ6 316 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 ERVMER34-1Q9H9K5 563 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 LANCL2Q9NS86 450 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 GMEB2Q9UKD1 530 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 A0A075B6Q4 140 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 SAGE2PA6NJ88 616 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 FAM183AA6NL82 134 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 C17orf105B2RV13 164 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 TMEM150CB9EJG8 249 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 SOCS6O14544 535 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 IGHA1P01876 353 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 CLPSP04118 112 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 GLB1P16278 677 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 NNATQ16517 81 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.34□□□□□ -0.43
CSTF2-201ENST00000372972 SLC35F1Q5T1Q4 408 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 PLBD1Q6P4A8 553 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 LINC00114Q6XXX2 140 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 MED25Q71SY5 747 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 MINDY2Q8NBR6 621 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 ZNF485Q8NCK3 441 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 PSD4Q8NDX1 1056 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 OR4C3Q8NH37 302 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 SENP5Q96HI0 755 aaPredicted RBP12.34□□□□□ -0.43
CSTF2-201ENST00000372972 IFT27Q9BW83 186 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 CMC2Q9NRP2 79 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 TXNL4BQ9NX01 149 aaKnown RBP12.34□□□□□ -0.43
CSTF2-201ENST00000372972 CRNNQ9UBG3 495 aaPredicted RBP12.34□□□□□ -0.43
CSTF2-201ENST00000372972 TNFRSF10DQ9UBN6 386 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 RPS6KB2Q9UBS0 482 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 MMACHCQ9Y4U1 282 aa12.34□□□□□ -0.43
CSTF2-201ENST00000372972 PNMA8CA0A1B0GUJ8 204 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 SERINC4A6NH21 518 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 EFCAB7A8K855 629 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 LAMTOR5O43504 91 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 DUX1O43812 170 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 HYAL3O43820 417 aaPredicted RBP12.33□□□□□ -0.44
CSTF2-201ENST00000372972 CSTAP01040 98 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 OR1D4P47884 311 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 RORCP51449 518 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 PSMD7P51665 324 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 FOXK2Q01167 660 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 CSTF1Q05048 431 aaKnown RBP12.33□□□□□ -0.44
CSTF2-201ENST00000372972 PMS2CLQ68D20 193 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 THSD4Q6ZMP0 1018 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 RTL4Q6ZR62 310 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 MEPCEQ7L2J0 689 aaKnown RBP12.33□□□□□ -0.44
CSTF2-201ENST00000372972 OAFQ86UD1 273 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 LSRQ86X29 649 aaPredicted RBP12.33□□□□□ -0.44
CSTF2-201ENST00000372972 CADM2Q8N3J6 435 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 OR51A7Q8NH64 312 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 PTPMT1Q8WUK0 201 aaPredicted RBP12.33□□□□□ -0.44
CSTF2-201ENST00000372972 UFD1Q92890 307 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 OR1F2PQ96R84 312 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 SECISBP2Q96T21 854 aaKnown RBP12.33□□□□□ -0.44
CSTF2-201ENST00000372972 PHOX2BQ99453 314 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 JAM3Q9BX67 310 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 RHBDL2Q9NX52 303 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 QPCTLQ9NXS2 382 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 BAIAP2Q9UQB8 552 aa12.33□□□□□ -0.44
CSTF2-201ENST00000372972 UPK1BO75841 260 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 ETV6P41212 452 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 CFHR1Q03591 330 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SHBQ15464 509 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 KIRREL2Q6UWL6 708 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 TMEM151BQ8IW70 566 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SLC35F3Q8IY50 421 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 MAML2Q8IZL2 1156 aaPredicted RBP12.32□□□□□ -0.44
CSTF2-201ENST00000372972 D2HGDHQ8N465 521 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 KLHL36Q8N4N3 616 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 PARP16Q8N5Y8 322 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 OR4C6Q8NH72 309 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 EDAQ92838 391 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 TMEM203Q969S6 136 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 NACC2Q96BF6 587 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 C1GALT1C1Q96EU7 318 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 KCNS3Q9BQ31 491 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 ZNF649Q9BS31 505 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 PNO1Q9NRX1 252 aaKnown RBP12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SNTG1Q9NSN8 517 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 ERVK13-1Q9NX77 482 aa12.32□□□□□ -0.44
CSTF2-201ENST00000372972 SF3B6Q9Y3B4 125 aaKnown RBP12.32□□□□□ -0.44
CSTF2-201ENST00000372972 UGT2A1Q9Y4X1 527 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms