RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 ANKRD27Q96NW4 1050 aa13.53□□□□□ -0.24
SNX21-203ENST00000372541 THUMPD3Q9BV44 507 aaKnown RBP13.53□□□□□ -0.24
SNX21-203ENST00000372541 EXOSC3Q9NQT5 275 aaKnown RBP13.53□□□□□ -0.24
SNX21-203ENST00000372541 RNF6Q9Y252 685 aa13.53□□□□□ -0.24
SNX21-203ENST00000372541 GTF3C1Q12789 2109 aa13.52□□□□□ -0.24
SNX21-203ENST00000372541 APCP25054 2843 aa13.52□□□□□ -0.24
SNX21-203ENST00000372541 LOC100653049A0A140TA62 436 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 CLDN24A6NM45 220 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 CLCA1A8K7I4 914 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 KDM4EB2RXH2 506 aaPredicted RBP13.52□□□□□ -0.25
SNX21-203ENST00000372541 SNX3O60493 162 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 KRT34O76011 436 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 ARAFP10398 606 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 PRKCAP17252 672 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 PSMA4P25789 261 aaKnown RBP13.52□□□□□ -0.25
SNX21-203ENST00000372541 ADH6P28332 368 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 MTPNP58546 118 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 ART3Q13508 389 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 CAPRIN1Q14444 709 aaKnown RBP13.52□□□□□ -0.25
SNX21-203ENST00000372541 LARS2Q15031 903 aaKnown RBP13.52□□□□□ -0.25
SNX21-203ENST00000372541 QPRTQ15274 297 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 TOMM34Q15785 309 aaPredicted RBP13.52□□□□□ -0.25
SNX21-203ENST00000372541 CYP51A1Q16850 503 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 MRPL2Q5T653 305 aaKnown RBP13.52□□□□□ -0.25
SNX21-203ENST00000372541 MTDHQ86UE4 582 aaKnown RBP13.52□□□□□ -0.25
SNX21-203ENST00000372541 C10orf111Q8N326 155 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 PCYOX1LQ8NBM8 494 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 OR52P1PQ8NH57 321 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 FBXO27Q8NI29 283 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 NFKBIDQ8NI38 313 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 POC1BQ8TC44 478 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 ST8SIA1Q92185 356 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 MARVELD3Q96A59 401 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 MRGPRX4Q96LA9 322 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 NPAS1Q99742 590 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 TRIM8Q9BZR9 551 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 TMEM38AQ9H6F2 299 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 CALHM2Q9HA72 323 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 BCL2L10Q9HD36 194 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 DNAJB12Q9NXW2 375 aaKnown RBP13.52□□□□□ -0.25
SNX21-203ENST00000372541 IFT52Q9Y366 437 aa13.52□□□□□ -0.25
SNX21-203ENST00000372541 KLF2Q9Y5W3 355 aaPredicted RBP13.52□□□□□ -0.25
SNX21-203ENST00000372541 DIDO1Q9BTC0 2240 aaKnown RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 A0A0G2JNJ9 132 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 MBD3L4A6NDZ8 208 aaPredicted RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 MBD3L3A6NE82 208 aaPredicted RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 MBD3L5A6NJ08 208 aaPredicted RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 HSPB2A8KAH6 182 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 EIF1AYO14602 144 aaKnown RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 DNAJA2O60884 412 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 BCAS1O75363 584 aaPredicted RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 NPPAP01160 153 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 IL2RAP01589 272 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 UQCRBP14927 111 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 SLC6A2P23975 617 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 RYKP34925 604 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 TIMP3P35625 211 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 SLC6A8P48029 635 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 CLDN20P56880 219 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 RPS3AP61247 264 aaKnown RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 RAC1P63000 192 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 CDK6Q00534 326 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 PLAURQ03405 335 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 SCARB2Q14108 478 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 HSPB2Q16082 182 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 RNF220Q5VTB9 566 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 REEP3Q6NUK4 255 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 ZNF836Q6ZNA1 936 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 SEM1Q6ZVN7 128 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 ADGRE4PQ86SQ3 457 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 VRK2Q86Y07 508 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 CCDC71Q8IV32 467 aaPredicted RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 TNIP2Q8NFZ5 429 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 MBD3L2Q8NHZ7 208 aaPredicted RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 RP9Q8TA86 221 aaKnown RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 ZNF563Q8TA94 476 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 TMEM234Q8WY98 164 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 CNOT9Q92600 299 aaKnown RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 ARMC7Q9H6L4 198 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 TMEM185BQ9H7F4 350 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 CLCF1Q9UBD9 225 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 Q9UFV3 132 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 ZNF232Q9UNY5 417 aa13.51□□□□□ -0.25
SNX21-203ENST00000372541 ZNF443Q9Y2A4 671 aaPredicted RBP13.51□□□□□ -0.25
SNX21-203ENST00000372541 ADGRG4Q8IZF6 3080 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 CDHR4A6H8M9 788 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 PRSS44E7EML9 344 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 H0YC42 278 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 ETV2O00321 342 aaPredicted RBP13.5□□□□□ -0.25
SNX21-203ENST00000372541 TOXO94900 526 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 PGM3O95394 542 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 THBS1P07996 1170 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 PABPC4LP0CB38 370 aaKnown RBP13.5□□□□□ -0.25
SNX21-203ENST00000372541 ETS2P15036 469 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 GRNP28799 593 aaKnown RBP13.5□□□□□ -0.25
SNX21-203ENST00000372541 SUCLG1P53597 346 aaKnown RBP13.5□□□□□ -0.25
SNX21-203ENST00000372541 TPD52P55327 224 aaPredicted RBP13.5□□□□□ -0.25
SNX21-203ENST00000372541 SELENBP1Q13228 472 aa13.5□□□□□ -0.25
SNX21-203ENST00000372541 SELPLGQ14242 412 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms