RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 PDZK1Q5T2W1 519 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 SHEQ5VZ18 495 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 HEPHL1Q6MZM0 1159 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 C20orf204Q6ZNR8 217 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 GLB1L3Q8NCI6 653 aaPredicted RBP16.89■□□□□ 0.29
TMEM53-201ENST00000372235 SLC25A43Q8WUT9 341 aaPredicted RBP16.89■□□□□ 0.29
TMEM53-201ENST00000372235 PMM1Q92871 262 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 NEURL3Q96EH8 262 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 PIK3IP1Q96FE7 263 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 OR51I1Q9H343 314 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 NKIRAS1Q9NYS0 192 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 LIPT1Q9Y234 373 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 WDR45Q9Y484 360 aa16.89■□□□□ 0.29
TMEM53-201ENST00000372235 SPG11Q96JI7 2443 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 PCNX3Q9H6A9 2034 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 NPIPA5A0A0B4J1W7 369 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 NPIPA7E9PJI5 369 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 ANKRD28O15084 1053 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 HDAC3O15379 428 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 DNAJA2O60884 412 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 SCN2BO60939 215 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 NTN1O95631 604 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 CPSF4O95639 269 aaKnown RBP16.88■□□□□ 0.29
TMEM53-201ENST00000372235 NPIPA8P0DM63 369 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 PSMB1P20618 241 aaKnown RBP16.88■□□□□ 0.29
TMEM53-201ENST00000372235 AGTR1P30556 359 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 CCR4P51679 360 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 QPRTQ15274 297 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 BEX5Q5H9J7 111 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 FCRLAQ7L513 359 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 SSX8Q7RTT4 187 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 LRRC75A-AS1Q8N1F1 130 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 STEAP2Q8NFT2 490 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 RFWD2Q8NHY2 731 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 XAGE5Q8WWM1 108 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 CCDC115Q96NT0 180 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 C6orf203Q9P0P8 240 aaPredicted RBP16.88■□□□□ 0.29
TMEM53-201ENST00000372235 KLHL9Q9P2J3 617 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 KLHL13Q9P2N7 655 aa16.88■□□□□ 0.29
TMEM53-201ENST00000372235 MARCOQ9UEW3 520 aaPredicted RBP16.88■□□□□ 0.29
TMEM53-201ENST00000372235 DEFB108AA8MXU0 73 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 TMCC2O75069 709 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 UGT2B17O75795 530 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 OPN1LWP04000 364 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 YES1P07947 543 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 CD53P19397 219 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 RPS26P62854 115 aaKnown RBP16.87■□□□□ 0.29
TMEM53-201ENST00000372235 CSNK2A1P68400 391 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-201ENST00000372235 GNA13Q14344 377 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 ACKR1Q16570 336 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 FAM174BQ3ZCQ3 159 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 SPANXN4Q5MJ08 99 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 SAXO2Q658L1 398 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 ANKRD42Q8N9B4 389 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 PANX1Q96RD7 426 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 NPAS1Q99742 590 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 SLC35A5Q9BS91 424 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 THUMPD3Q9BV44 507 aaKnown RBP16.87■□□□□ 0.29
TMEM53-201ENST00000372235 SAP130Q9H0E3 1048 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 NGBQ9NPG2 151 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-201ENST00000372235 MKLN1Q9UL63 735 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 CLEC4AQ9UMR7 237 aa16.87■□□□□ 0.29
TMEM53-201ENST00000372235 TMEM120BA0PK00 339 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 KIAA0513O60268 411 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 FCMRO60667 390 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 CYP7B1O75881 506 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 IL6P05231 212 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 OR12D1P0DN82 309 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 IDO1P14902 403 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 CCKARP32238 428 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 APOBEC1P41238 236 aaKnown RBP16.86■□□□□ 0.29
TMEM53-201ENST00000372235 ADAM8P78325 824 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 SKP2Q13309 424 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 MPP2Q14168 576 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 P2RY6Q15077 328 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 STAC2Q6ZMT1 411 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 ANKRD46Q86W74 232 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 CMIPQ8IY22 773 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 ZNF619Q8N2I2 560 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 NUDT8Q8WV74 236 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 ROPN1LQ96C74 230 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 EXOSC3Q9NQT5 275 aaKnown RBP16.86■□□□□ 0.29
TMEM53-201ENST00000372235 PNPOQ9NVS9 261 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 AIG1Q9NVV5 245 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 MED13LQ71F56 2210 aa16.86■□□□□ 0.29
TMEM53-201ENST00000372235 SMPD2O60906 423 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 KRT75O95678 551 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 PGRP06401 933 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 NID1P14543 1247 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 UQCRBP14927 111 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 ENPP1P22413 925 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 HTR3AP46098 478 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 CLK1P49759 484 aaKnown RBP16.85■□□□□ 0.29
TMEM53-201ENST00000372235 MAP2K6P52564 334 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 TIGD2Q4W5G0 525 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 GPAT3Q53EU6 434 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 TNFAIP8L2Q6P589 184 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-201ENST00000372235 ZNF550Q7Z398 422 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms