RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 A0A0A6YYC8 382 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 A0A1W2PQL4 384 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 I3L1I5 382 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 RDH16O75452 317 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 GJB3O75712 270 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 NDUFV2P19404 249 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 ADH6P28332 368 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 PBX2P40425 430 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 CGB2Q6NT52 195 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 METTL2BQ6P1Q9 378 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 TMPRSS12Q86WS5 348 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 PPP1R3BQ86XI6 285 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 PIANPQ8IYJ0 282 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 FRS2Q8WU20 508 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 DDIT4LQ96D03 193 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF578Q96N58 590 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 HDHD5Q9BXW7 423 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 ACTRT3Q9BYD9 372 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 DCAF16Q9NXF7 216 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 TAS2R8Q9NYW2 309 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 A0A1B0GV72 72 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 C17orf105B2RV13 164 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 B4GAT1O43505 415 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 SRYQ05066 204 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 ABLIM2Q6H8Q1 611 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 FTMTQ8N4E7 242 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF808Q8N4W9 903 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 ELP5Q8TE02 316 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 MUL1Q969V5 352 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 ASB16Q96NS5 453 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 SYT11Q9BT88 431 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 POT1Q9NUX5 634 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 KLHL21Q9UJP4 597 aa12.52□□□□□ -0.41
RAPGEF1-201ENST00000372189 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 MT-CO2P00403 227 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 PYCR1P32322 319 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 ART1P52961 327 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 DLX2Q07687 328 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 GNMTQ14749 295 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 CA5BP1Q8WTZ4 195 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 GPATCH2Q9NW75 528 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 CTHP32929 405 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 ACVR1BP36896 505 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 MTNR1AP48039 350 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 GAS6Q14393 721 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 RPE65Q16518 533 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 LBHQ53QV2 105 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 TMEM31Q5JXX7 168 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 CFAP77Q6ZQR2 320 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 SLC6A7Q99884 636 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 CITED2Q99967 270 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 DMRT3Q9NQL9 472 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 TMEM14AQ9Y6G1 99 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 A0A1W2PPK0 400 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 CAPN3P20807 821 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 CA5AP35218 305 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 PEA15Q15121 130 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 CDNFQ49AH0 187 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 ATPAF1Q5TC12 328 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 HMGN2P46Q86SG4 172 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 NLGN4XQ8N0W4 816 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 ARL14Q8N4G2 192 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 NETO1Q8TDF5 533 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 TANKQ92844 425 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 APIPQ96GX9 242 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 SDR39U1Q9NRG7 319 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 OSMP13725 252 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 GPR85P60893 370 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 MICAQ29983 383 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 BCL2L15Q5TBC7 163 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 TMEM205Q6UW68 189 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 TMPPEQ6ZT21 453 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 CNN2Q99439 309 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 TREX1Q9NSU2 369 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 RPH3ALQ9UNE2 315 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 USP54Q70EL1 1684 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 TCAPO15273 167 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 BCL7CQ8WUZ0 217 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 NEIL2Q969S2 332 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 PTERQ96BW5 349 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 DNAJA3Q96EY1 480 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 ADAM18Q9Y3Q7 739 aa12.51□□□□□ -0.41
RAPGEF1-201ENST00000372189 ADORA3P0DMS8 318 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 DCTP40126 519 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 CDK10Q15131 360 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 SF3B4Q15427 424 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF77Q15935 545 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR52N2Q8NGI0 321 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 NECAB3Q96P71 396 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 AGPAT4Q9NRZ5 378 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 KLHL9Q9P2J3 617 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 RFPL3O75679 317 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 C1orf105O95561 183 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 FABP1P07148 127 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 CCR7P32248 378 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 CNR2P34972 360 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms